RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PDXPQ96GD0 296 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 MAGIXQ9H6Y5 334 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 KCNK12Q9HB15 430 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 SCHIP1Q9P0W5 487 aaPredicted RBP16.71■□□□□ 0.26
SMC6-206ENST00000446852 DNAJB9Q9UBS3 223 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 CD207Q9UJ71 328 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 FANCMQ8IYD8 2048 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 SNAP29O95721 258 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 IL1RNP18510 177 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 CTBSQ01459 385 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 TFF2Q03403 129 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 DEPDC1Q5TB30 811 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 PLD3Q8IV08 490 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 SLC44A3Q8N4M1 653 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 OR52E1Q8NGJ3 308 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 OR2A1Q8NGT9 310 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 PPCDCQ96CD2 204 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 PYURFQ96I23 114 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 VPS4AQ9UN37 437 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 ICKQ9UPZ9 632 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 NCKAP1Q9Y2A7 1128 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 GMEB1Q9Y692 573 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 SHISA7A6NL88 538 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 C6orf47O95873 294 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 NTRK1P04629 796 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 ACADMP11310 421 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 CXCR2P25025 360 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 CSNK1G2P78368 415 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 TCEA2Q15560 299 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 CYBRD1Q53TN4 286 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 KRT80Q6KB66 452 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 ZNF852Q6ZMS4 543 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 R3HCC1LQ7Z5L2 792 aaKnown RBP16.7■□□□□ 0.26
SMC6-206ENST00000446852 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 GOT1L1Q8NHS2 421 aaPredicted RBP16.7■□□□□ 0.26
SMC6-206ENST00000446852 ASB12Q8WXK4 309 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 OR1E3Q8WZA6 343 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 FBXL20Q96IG2 436 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 SOX17Q9H6I2 414 aaPredicted RBP16.7■□□□□ 0.26
SMC6-206ENST00000446852 C8orf33Q9H7E9 229 aaPredicted RBP16.7■□□□□ 0.26
SMC6-206ENST00000446852 ATAD3AQ9NVI7 634 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 LRP4O75096 1905 aa16.7■□□□□ 0.26
SMC6-206ENST00000446852 KCNJ13O60928 360 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 BMP8BP34820 402 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 BSGP35613 385 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 CLCN2P51788 898 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 ARSFP54793 590 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 RPE65Q16518 533 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 LIN52Q52LA3 116 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMC6-206ENST00000446852 ERICH5Q6P6B1 374 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 FAM20CQ8IXL6 584 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 ADGRF3Q8IZF5 1079 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 PGBD3Q8N328 593 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 SYNPOQ8N3V7 929 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 OR2L8Q8NGY9 312 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 CYGBQ8WWM9 190 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 LHX9Q9NQ69 397 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 SPASTQ9UBP0 616 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 ZNF282Q9UDV7 671 aaPredicted RBP16.69■□□□□ 0.26
SMC6-206ENST00000446852 LCMT2O60294 686 aaKnown RBP16.69■□□□□ 0.26
SMC6-206ENST00000446852 SEMA3DO95025 777 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 ZNF682O95780 498 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 CLIC3O95833 236 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 EML2O95834 649 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 MYF6P23409 242 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 TPMTP51580 245 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 MVDP53602 400 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 PRDX1Q06830 199 aaKnown RBP16.69■□□□□ 0.26
SMC6-206ENST00000446852 LRRC74AQ0VAA2 488 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 APOFQ13790 326 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 KRT33BQ14525 404 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 RGNQ15493 299 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 STK32CQ86UX6 486 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 HS3ST5Q8IZT8 346 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 OR2M4Q96R27 311 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 PNPLA3Q9NST1 481 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 GPATCH2Q9NW75 528 aa16.69■□□□□ 0.26
SMC6-206ENST00000446852 SAMD4AQ9UPU9 718 aaKnown RBP16.69■□□□□ 0.26
SMC6-206ENST00000446852 OR1F1O43749 312 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 GPR37L1O60883 481 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 ALPLP05186 524 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 TFAP2AP05549 437 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 KDELR2P33947 212 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 RPL3P39023 403 aaKnown RBP16.68■□□□□ 0.26
SMC6-206ENST00000446852 VAC14Q08AM6 782 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 PPP1R8Q12972 351 aaKnown RBP16.68■□□□□ 0.26
SMC6-206ENST00000446852 CCNYL2Q5T2Q4 361 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 IKBIPQ70UQ0 350 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 EID3Q8N140 333 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 MAL2Q969L2 176 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 MTERF3Q96E29 417 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 MVB12BQ9H7P6 319 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 NT5DC2Q9H857 520 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 TAAR2Q9P1P5 351 aa16.68■□□□□ 0.26
SMC6-206ENST00000446852 PNMA8BQ9ULN7 279 aaPredicted RBP16.68■□□□□ 0.26
SMC6-206ENST00000446852 CLPTM1O96005 669 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms