RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ZNF142P52746 1687 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 MTMR11A4FU01 709 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZNF195O14628 629 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZNF853P0CG23 659 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 SLC2A2P11168 524 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 MYL6BP14649 208 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 DNA2P51530 1060 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 BFSP1Q12934 665 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 HNRNPDQ14103 355 aaKnown RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 OPCMLQ14982 345 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZFP69Q49AA0 526 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZRANB3Q5FWF4 1079 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 HECTD3Q5T447 861 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 TXNRD3NBQ6F5E7 133 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 NOTUMQ6P988 496 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 PET117Q6UWS5 81 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 Q6ZRP5 223 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 CPEB2Q7Z5Q1 589 aaKnown RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 AMIGO1Q86WK6 493 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 HOGA1Q86XE5 327 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 RCOR2Q8IZ40 523 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 OR8H3Q8N146 312 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 LRTM2Q8N967 370 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 GOT1L1Q8NHS2 421 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 GATAD1Q8WUU5 269 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 TSACCQ96A04 125 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 FAM162AQ96A26 154 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 ERO1AQ96HE7 468 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 MAGED4Q96JG8 741 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 THUMPD3Q9BV44 507 aaKnown RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 EGLN3Q9H6Z9 239 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 PKD2L2Q9NZM6 624 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 DNAJB9Q9UBS3 223 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 C19orf25Q9UFG5 118 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 POMT1Q9Y6A1 747 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 PTPRUQ92729 1446 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 PEAK1Q9H792 1746 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 ABCC4O15439 1325 aa3.92□□□□□ -1.78
HMGB3P6-201ENST00000444896 RTL1A6NKG5 1358 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 KIAA0232Q92628 1395 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 PIK3C2AO00443 1686 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 A0A1W2PRQ8 180 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 F8VVB4 439 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 F8VWA3 439 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 WDR46O15213 610 aaKnown RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 TEX28O15482 410 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 PPIP5K2O43314 1243 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SELENOFO60613 162 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 KRT33AO76009 404 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 PGLSO95336 258 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 ANKRD34CP0C6C1 535 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 STAG3L1P0CL83 205 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 EPORP19235 508 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 LBX1P52954 281 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 HILS1P60008 231 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SNRPD1P62314 119 aaKnown RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 MYL7Q01449 175 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 RBBP7Q16576 425 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 CDO1Q16878 200 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 C14orf177Q52M58 125 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SSH2Q76I76 1423 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 TICAM2Q86XR7 235 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 HSCBQ8IWL3 235 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SIX6OS1Q8N1H7 587 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SLC37A3Q8NCC5 494 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 GPRC5AQ8NFJ5 357 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SMAP2Q8WU79 429 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 RIT1Q92963 219 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 SPATA17Q96L03 361 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 ART5Q96L15 291 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 LPAR4Q99677 370 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 CITED2Q99967 270 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 ADPGKQ9BRR6 497 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 FAM49AQ9H0Q0 323 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 RIMS4Q9H426 269 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 MINDY3Q9H8M7 445 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 MRGBPQ9NV56 204 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 KLHL8Q9P2G9 620 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 PRDM4Q9UKN5 801 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 GTF3C4Q9UKN8 822 aa3.91□□□□□ -1.78
HMGB3P6-201ENST00000444896 KDRP35968 1356 aa3.9□□□□□ -1.78
HMGB3P6-201ENST00000444896 A0A087WUV0 522 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 A0A1W2PR80 420 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 FLRT2O43155 660 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 HTATSF1O43719 755 aaKnown RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 HMMRO75330 724 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 CLDN1O95832 211 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 VIMP08670 466 aaKnown RBP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 RNF224P0DH78 156 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 CYP2A7P20853 494 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 PAX9P55771 341 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 ERVK11-1P61568 191 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 SULT2A1Q06520 285 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 TRA2AQ13595 282 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 TRIM29Q14134 588 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 PTPN14Q15678 1187 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 OR4C11Q6IEV9 310 aa3.9□□□□□ -1.79
HMGB3P6-201ENST00000444896 ANKRD23Q86SG2 305 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms