RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RRADP55042 308 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 SNRPNP63162 240 aaKnown RBP16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 MAT1AQ00266 395 aaKnown RBP16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 ATP1A4Q13733 1029 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 E2F2Q14209 437 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 RBBP7Q16576 425 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 SYT16Q17RD7 645 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 DEFB134Q4QY38 66 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 VWA2Q5GFL6 755 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 MED27Q6P2C8 311 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 PCSK4Q6UW60 755 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 PDSS2Q86YH6 399 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 UTP15Q8TED0 518 aaKnown RBP16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 ATP6V1E2Q96A05 226 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 NACC2Q96BF6 587 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 VPS50Q96JG6 964 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 FAR2Q96K12 515 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 ROPN1BQ9BZX4 212 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 TGIF2Q9GZN2 237 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 RHBGQ9H310 441 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 ROPN1Q9HAT0 212 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 HCN3Q9P1Z3 774 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 PCTPQ9UKL6 214 aa16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 ZNF490Q9ULM2 529 aaPredicted RBP16.54■□□□□ 0.24
SMARCAL1-209ENST00000444508 ATRXP46100 2492 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 FOXO6A8MYZ6 492 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 GALR3O60755 368 aaPredicted RBP16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 SBK3P0C264 359 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 SFTPCP11686 197 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 PCNAP12004 261 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 SERPINB1P30740 379 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 XCR1P46094 333 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 RAB8AP61006 207 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 HYAL2Q12891 473 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 LY6DQ14210 128 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 LIPJQ5W064 366 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 GRHL2Q6ISB3 625 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 MED25Q71SY5 747 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 PPP1R32Q7Z5V6 425 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 APLFQ8IW19 511 aaPredicted RBP16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 TMEM151AQ8N4L1 468 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 TMEM102Q8N9M5 508 aaPredicted RBP16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 OR51Q1Q8NH59 317 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 SLC39A7Q92504 469 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 GAL3ST3Q96A11 431 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 BBC3Q96PG8 261 aaPredicted RBP16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 ADNPQ9H2P0 1102 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 KLHL31Q9H511 634 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 NOL11Q9H8H0 719 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 ACSS2Q9NR19 701 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 P4HTMQ9NXG6 502 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 C3orf18Q9UK00 162 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 PLAAQ9Y263 795 aa16.53■□□□□ 0.24
SMARCAL1-209ENST00000444508 A0A088AWK7 358 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 ZNF860A6NHJ4 632 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 COPEO14579 308 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 UGDHO60701 494 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 CLDN9O95484 217 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 HEXBP07686 556 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 KRT4P19013 534 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 ZNF10P21506 573 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 ATP5F1P24539 256 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 CCNG1P51959 295 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 EMP2P54851 167 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 TGM3Q08188 693 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 KCNAB2Q13303 367 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 SOWAHCQ53LP3 525 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 MFSD4BQ5TF39 518 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 TMEM151BQ8IW70 566 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 ZC3H7AQ8IWR0 971 aaKnown RBP16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 LAS2Q8IYD9 372 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 EXD3Q8N9H8 876 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 PPP4R1Q8TF05 950 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 REPS1Q96D71 796 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 FER1L6-AS2Q96M78 137 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 ING2Q9H160 280 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 CLK4Q9HAZ1 481 aaKnown RBP16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 ADGRE2Q9UHX3 823 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 GRID1Q9ULK0 1009 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 PCDHGA11Q9Y5H2 935 aa16.52■□□□□ 0.24
SMARCAL1-209ENST00000444508 LRIT2A6NDA9 550 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 IDSB3KWA1 339 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 ERI3O43414 337 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 BMP10O95393 424 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 RPS17P08708 135 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 IL10P22301 178 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 HNRNPH1P31943 449 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 CRHR1P34998 444 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 HERVK_113P63132 956 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 PHEXP78562 749 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 CHAF1BQ13112 559 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 MINDY4Q4G0A6 757 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 CPZQ66K79 652 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 ADNP2Q6IQ32 1131 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 TRIM40Q6P9F5 258 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 SH2D5Q6ZV89 423 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 VN1R5Q7Z5H4 357 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 SLC22A9Q8IVM8 553 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 C4orf33Q8N1A6 199 aa16.51■□□□□ 0.23
SMARCAL1-209ENST00000444508 OR7G3Q8NG95 312 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms