RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 ARHGEF33A8MVX0 844 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 MMP2P08253 660 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 DBTP11182 482 aaKnown RBP8.41□□□□□ -1.06
CCDC113-202ENST00000443128 HNRNPA2B1P22626 353 aaKnown RBP8.41□□□□□ -1.06
CCDC113-202ENST00000443128 IL12BP29460 328 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 CLDN8P56748 225 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 ABATP80404 500 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 CDK3Q00526 305 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 ID2Q02363 134 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 ZNF630Q2M218 657 aaPredicted RBP8.41□□□□□ -1.06
CCDC113-202ENST00000443128 EIPR1Q53HC9 387 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 CATSPEREQ5SY80 951 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 ASPGQ86U10 573 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 TMC8Q8IU68 726 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 DGCR14Q96DF8 476 aaKnown RBP8.41□□□□□ -1.06
CCDC113-202ENST00000443128 APIPQ96GX9 242 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 PKMYT1Q99640 499 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 CDC14AQ9UNH5 594 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 TTC3P53804 2025 aa8.41□□□□□ -1.06
CCDC113-202ENST00000443128 GREB1LQ9C091 1923 aaPredicted RBP8.41□□□□□ -1.06
CCDC113-202ENST00000443128 OR5K4A6NMS3 321 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 T-ENOLP0DO92 83 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 VSX2P58304 361 aaPredicted RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 LIMS2Q7Z4I7 341 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 LGI4Q8N135 537 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 MINDY1Q8N5J2 469 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ENDOVQ8N8Q3 282 aaKnown RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 RAB8BQ92930 207 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ARMC5Q96C12 935 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 TAS2R9Q9NYW1 312 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 DKK3Q9UBP4 350 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 NUMBLQ9Y6R0 609 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 COMMD3-BMI1R4GMX3 469 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 NUP205Q92621 2012 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 MCIDASD6RGH6 385 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 H3BNC9 293 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 NUAK1O60285 661 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ANXA8P13928 327 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 MATN1P21941 496 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 AOAHP28039 575 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 OXTRP30559 389 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 KCNC1P48547 511 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CLDN2P57739 230 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 LGALS3BPQ08380 585 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 HYAL2Q12891 473 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 LIN52Q52LA3 116 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ZNF311Q5JNZ3 666 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CDKL4Q5MAI5 379 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 DUS1LQ6P1R4 473 aaKnown RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 PNCKQ6P2M8 343 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 PACRGLQ8N7B6 248 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 AMER2Q8N7J2 671 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 OR56A1Q8NGH5 318 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 SNRNP27Q8WVK2 155 aaKnown RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 KCNC2Q96PR1 638 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 NDC1Q9BTX1 674 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 APOOQ9BUR5 198 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 PTGFRNQ9P2B2 879 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 FAM92AA1XBS5 289 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 OR52A4PA6NMU1 304 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 AGR2O95994 175 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 THEGLP0DJG4 465 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 TFPIP10646 304 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 FOSL2P15408 326 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CAPN3P20807 821 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 HRH2P25021 359 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 PDHA2P29803 388 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 PSMD4P55036 377 aaKnown RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ITGA1P56199 1179 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CSNK2BP67870 215 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 SLAMF1Q13291 335 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ATP1A4Q13733 1029 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 COL9A2Q14055 689 aaPredicted RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CCNIQ14094 377 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 SFT2D3Q587I9 215 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 IER5LQ5T953 404 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ATG9BQ674R7 924 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 GRHL2Q6ISB3 625 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CHRDL2Q6WN34 429 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 FAM220AQ7Z4H9 259 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 CCDC116Q8IYX3 515 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 ZSWIM3Q96MP5 696 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 SDR39U1Q9NRG7 319 aaPredicted RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 LYARQ9NX58 379 aaKnown RBP8.4□□□□□ -1.06
CCDC113-202ENST00000443128 IL37Q9NZH6 218 aa8.4□□□□□ -1.06
CCDC113-202ENST00000443128 COL11A1P12107 1806 aaPredicted RBP8.4□□□□□ -1.07
CCDC113-202ENST00000443128 FOCADQ5VW36 1801 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 MFN2O95140 757 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 PRLP01236 227 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 MRPS15P82914 257 aaKnown RBP8.4□□□□□ -1.07
CCDC113-202ENST00000443128 MRPL28Q13084 256 aaKnown RBP8.4□□□□□ -1.07
CCDC113-202ENST00000443128 DEFB134Q4QY38 66 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 CYBRD1Q53TN4 286 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 PDZK1Q5T2W1 519 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 HACD2Q6Y1H2 254 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 VN1R2Q8NFZ6 395 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 KAT2AQ92830 837 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 PMEPA1Q969W9 287 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 NODALQ96S42 347 aa8.4□□□□□ -1.07
CCDC113-202ENST00000443128 SLC30A3Q99726 388 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms