RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SEMA3BQ13214 749 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TP53BP2Q13625 1128 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SNTB1Q13884 538 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SSPNQ14714 243 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PTPRRQ15256 657 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TRAM1Q15629 374 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TARBP2Q15633 366 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SMAD1Q15797 465 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 HFEQ30201 348 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GPR33Q49SQ1 333 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TCTE1Q5JU00 501 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 THEM4Q5T1C6 240 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GPRC6AQ5T6X5 926 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 LCN1P1Q5VSP4 162 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 IER5Q5VY09 327 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TMEM88Q6PEY1 159 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PAPD4Q6PIY7 484 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 GPRIN3Q6ZVF9 776 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 STRADAQ7RTN6 431 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FAM35AQ86V20 835 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 C12orf40Q86WS4 652 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 HIPK1Q86Z02 1210 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SPPL2CQ8IUH8 684 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 NPAS4Q8IUM7 802 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 NKAIN4Q8IVV8 208 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 PPIL6Q8IXY8 311 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC22A15Q8IZD6 547 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 NLGN4XQ8N0W4 816 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF561Q8N587 486 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CNTD1Q8N815 330 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 CHDHQ8NE62 594 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 OR4M2Q8NGB6 313 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 OR4M1Q8NGD0 313 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 HUS1BQ8NHY5 278 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ITFG1Q8TB96 612 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ELP5Q8TE02 316 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 DCAKDQ8WVC6 231 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ASB15Q8WXK1 588 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF669Q96BR6 464 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 PDXPQ96GD0 296 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RHOVQ96L33 236 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF558Q96NG5 402 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 GAL3ST4Q96RP7 486 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 KCNA7Q96RP8 456 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SEPT5Q99719 369 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 RBM4BQ9BQ04 359 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 CCM2Q9BSQ5 444 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RPP25Q9BUL9 199 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 SLC25A23Q9BV35 468 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 RBM4Q9BWF3 364 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 BCO2Q9BYV7 579 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZNF436Q9C0F3 470 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 RIMS4Q9H426 269 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 NCOR1P1Q9H4R4 102 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 POMKQ9H5K3 350 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 ESRP2Q9H6T0 727 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 ZBTB20Q9HC78 741 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 CHRAC1Q9NRG0 131 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 EXD2Q9NVH0 621 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 FBXL12Q9NXK8 326 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 BFARQ9NZS9 450 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 SARDHQ9UL12 918 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 TBX21Q9UL17 535 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 STUB1Q9UNE7 303 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 DNMT3AQ9Y6K1 912 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 TP53BP1Q12888 1972 aaPredicted RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 LTBP1Q14766 1721 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 MED13LQ71F56 2210 aa2.69□□□□□ -1.98
LIG4-203ENST00000442234 DICER1Q9UPY3 1922 aaKnown RBP2.69□□□□□ -1.98
LIG4-203ENST00000442234 A0A0A0MRY4 1105 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TRAV19A0A0A6YYK7 116 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 A0A1W2PQ09 198 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TTC24A2A3L6 582 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 ACOD1A6NK06 481 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 KCNU1A8MYU2 1149 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CBX4O00257 560 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 CLIC2O15247 247 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 FABP7O15540 132 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 RGS10O43665 173 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MMP20O60882 483 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LILRA1O75019 489 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 LILRB5O75023 590 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TOXO94900 526 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 IL18RAPO95256 599 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 AP2A1O95782 977 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PAK4O96013 591 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 SERPINA1P01009 418 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 PRKCGP05129 697 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 JUNP05412 331 aaKnown RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 FBP1P09467 338 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DHRS4L1P0CG22 281 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ANXA3P12429 323 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 MYF5P13349 255 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ZNF37AP17032 561 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 ITGB6P18564 788 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 DNASE1P24855 282 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 TRHRP34981 398 aaPredicted RBP2.68□□□□□ -1.98
LIG4-203ENST00000442234 CA5AP35218 305 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ADRA1BP35368 520 aa2.68□□□□□ -1.98
LIG4-203ENST00000442234 ELK3P41970 407 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms