RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 WDPCPO95876 746 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 SERPIND1P05546 499 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 FHP07954 510 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 GSTA2P09210 222 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 ITGAMP11215 1152 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 CDH1P12830 882 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 RNH1P13489 461 aaKnown RBP7.33□□□□□ -1.24
CD44-211ENST00000442151 EEF1DP29692 281 aaKnown RBP7.33□□□□□ -1.24
CD44-211ENST00000442151 CALCOCO2Q13137 446 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 LAPTM5Q13571 262 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 HIST2H2ACQ16777 129 aaPredicted RBP7.33□□□□□ -1.24
CD44-211ENST00000442151 HIST2H2AA3Q6FI13 130 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 PAPD4Q6PIY7 484 aaKnown RBP7.33□□□□□ -1.24
CD44-211ENST00000442151 ADAMTSL2Q86TH1 951 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 ARHGEF39Q8N4T4 335 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 POGLUT1Q8NBL1 392 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 SRFBP1Q8NEF9 429 aaKnown RBP7.33□□□□□ -1.24
CD44-211ENST00000442151 CFAP36Q96G28 342 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 NDNQ99608 321 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 EGFL8Q99944 293 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 CCDC77Q9BR77 488 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 ROGDIQ9GZN7 287 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 NT5DC2Q9H857 520 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 CTNNAL1Q9UBT7 734 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 MED16Q9Y2X0 877 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 NAALAD2Q9Y3Q0 740 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 SAR1BQ9Y6B6 198 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 TRGV8A0A0C4DH27 118 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 FEZF1A0PJY2 475 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 MASP2O00187 686 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 EIF3HO15372 352 aaKnown RBP eCLIP7.32□□□□□ -1.24
CD44-211ENST00000442151 P2RX6O15547 441 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 NDUFS4O43181 175 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 SEC24DO94855 1032 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 S100BP04271 92 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 SERPINA6P08185 405 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 GNAZP19086 355 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 AGAP20933 346 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 ELK3P41970 407 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 SCTRP47872 440 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 FOXL2P58012 376 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 MAT1AQ00266 395 aaKnown RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 ALDH6A1Q02252 535 aaKnown RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 OC90Q02509 493 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 BIKQ13323 160 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 RBBP5Q15291 538 aaKnown RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 SFT2D3Q587I9 215 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 STEAP4Q687X5 459 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 ZNF324BQ6AW86 544 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 SLC25A25Q6KCM7 469 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 PAOXQ6QHF9 649 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 NXPE4Q6UWF7 544 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 QSOX2Q6ZRP7 698 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 VN1R4Q7Z5H5 301 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 RPS19BP1Q86WX3 136 aaKnown RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 PLD3Q8IV08 490 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 ZNF808Q8N4W9 903 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 ZCCHC10Q8TBK6 192 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 THAP3Q8WTV1 239 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 NANOS1Q8WY41 292 aaKnown RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 UBE2E3Q969T4 207 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 PEX11GQ96HA9 241 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 PTCHD1Q96NR3 888 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 NAPGQ99747 312 aaPredicted RBP7.32□□□□□ -1.24
CD44-211ENST00000442151 GPAMQ9HCL2 828 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 PRM3Q9NNZ6 103 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 ADAMTS6Q9UKP5 1117 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 NTNG1Q9Y2I2 539 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 MMACHCQ9Y4U1 282 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 OARD1Q9Y530 152 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 SPACA6W5XKT8 324 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 SHANK1Q9Y566 2161 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 NBASA2RRP1 2371 aa7.32□□□□□ -1.24
CD44-211ENST00000442151 ANKDD1BA6NHY2 528 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 KLRC4-KLRK1H3BQV0 150 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 E2F3O00716 465 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CHST10O43529 356 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 LCMT2O60294 686 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 GALR3O60755 368 aaPredicted RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 SNRNP200O75643 2136 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 GUCA1CO95843 209 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 C1GALT1C1LP0DN25 315 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 IL1RNP18510 177 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 DCTP40126 519 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CDKN2DP55273 166 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 SLC26A5P58743 744 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 ATP6V0D1P61421 351 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 GNG11P61952 73 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 YBX1P67809 324 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 POU4F1Q01851 419 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CAV1Q03135 178 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 CBLBQ13191 982 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 USP10Q14694 798 aaKnown RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 ABRAXAS2Q15018 415 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 SYT16Q17RD7 645 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 PAGE2BQ5JRK9 111 aa7.31□□□□□ -1.24
CD44-211ENST00000442151 SP5Q6BEB4 398 aaPredicted RBP7.31□□□□□ -1.24
CD44-211ENST00000442151 BNC2Q6ZN30 1099 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms