RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CYTH2Q99418 400 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 KIFC1Q9BW19 673 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 MRPS30Q9NP92 439 aaKnown RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 KCNJ16Q9NPI9 418 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 NINJ2Q9NZG7 142 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 LRFN1Q9P244 771 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 GNPTGQ9UJJ9 305 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 RIMKLBQ9ULI2 386 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 SOX13Q9UN79 622 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 CHMP2BQ9UQN3 213 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 RUVBL2Q9Y230 463 aaKnown RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 NFS1Q9Y697 457 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 MAN1A2O60476 641 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 NUDT17P0C025 328 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 AOAHP28039 575 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 MSX1P28360 303 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 CHRNB4P30926 498 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 PTGER1P34995 402 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 PTGS2P35354 604 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 PPARGP37231 505 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 IFFO1Q0D2I5 559 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 FOXD4Q12950 439 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 TSTA3Q13630 321 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 SLC29A2Q14542 456 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 EXT1Q16394 746 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 FASTKD1Q53R41 847 aaKnown RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 FGD2Q7Z6J4 655 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 CPSF7Q8N684 471 aaKnown RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 SLC5A8Q8N695 610 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 FAM57AQ8TBR7 257 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 HDAC10Q969S8 669 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 FOPNLQ96NB1 174 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 NPAS2Q99743 824 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 PLCD4Q9BRC7 762 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 FUT8Q9BYC5 575 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 ROPN1BQ9BZX4 212 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 SYNPO2LQ9H987 977 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 ROPN1Q9HAT0 212 aaPredicted RBP13.25□□□□□ -0.29
LINC01088-201ENST00000437737 SYBUQ9NX95 663 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 SPATA7Q9P0W8 599 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 RNF6Q9Y252 685 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 TCAF1Q9Y4C2 921 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 ACANP16112 2415 aa13.25□□□□□ -0.29
LINC01088-201ENST00000437737 ABCA4P78363 2273 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 A0A1B0GTH9 108 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 TXNDC9O14530 226 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 SLC25A12O75746 678 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 NEURL1O76050 574 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 ACSL3O95573 720 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 PSMA3P25788 255 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 RPA3P35244 121 aaPredicted RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 CCNFP41002 786 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 TAS2R50P59544 299 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 TFF3Q07654 80 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 CEBPEQ15744 281 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 NDUFA9Q16795 377 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 KLHL38Q2WGJ6 581 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 RNFT1Q5M7Z0 435 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 HP1BP3Q5SSJ5 553 aaPredicted RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 STEAP4Q687X5 459 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 PTRHD1Q6GMV3 140 aaKnown RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 ANKRD37Q7Z713 158 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 PAQR7Q86WK9 346 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 MARVELD2Q8N4S9 558 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 OR13J1Q8NGT2 312 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 OR6P1Q8NGX9 317 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 OR4L1Q8NH43 312 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 LILRB4Q8NHJ6 448 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 M1APQ8TC57 530 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 RND1Q92730 232 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 CDKL2Q92772 493 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 CFAP36Q96G28 342 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 PANX3Q96QZ0 392 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 SLC24A3Q9HC58 644 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 MMP25Q9NPA2 562 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 DNAJB12Q9NXW2 375 aaKnown RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 UTP6Q9NYH9 597 aaKnown RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 FETUBQ9UGM5 382 aa13.24□□□□□ -0.29
LINC01088-201ENST00000437737 TSR3Q9UJK0 312 aaKnown RBP13.24□□□□□ -0.29
LINC01088-201ENST00000437737 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 TFECO14948 347 aaPredicted RBP13.23□□□□□ -0.29
LINC01088-201ENST00000437737 NME2P1O60361 137 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 CDC40O60508 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01088-201ENST00000437737 BANF1O75531 89 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 TOXO94900 526 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 CYC1P08574 325 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 HOXD4P09016 255 aaPredicted RBP13.23□□□□□ -0.29
LINC01088-201ENST00000437737 PKMP14618 531 aaKnown RBP13.23□□□□□ -0.29
LINC01088-201ENST00000437737 NME2P22392 152 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 AGTR2P50052 363 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 ILF2Q12905 390 aaKnown RBP13.23□□□□□ -0.29
LINC01088-201ENST00000437737 FAM53BQ14153 422 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 SEMA3AQ14563 771 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 ANKRD20A4Q4UJ75 823 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 SUSD1Q6UWL2 747 aa13.23□□□□□ -0.29
LINC01088-201ENST00000437737 ADCK2Q7Z695 626 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 386 ms