RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 IPPKQ9H8X2 491 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 ACTR8Q9H981 624 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 HRASLS2Q9NWW9 162 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 GPRC5BQ9NZH0 403 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 OR6C2Q9NZP2 312 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 MARCOQ9UEW3 520 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-208ENST00000437607 TAC3Q9UHF0 121 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SLC22A14Q9Y267 594 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 KCNE2Q9Y6J6 123 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CSMD1Q96PZ7 3565 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CHEK2O96017 543 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 ENO1P06733 434 aaKnown RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 CAPN1P07384 714 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 KITP10721 976 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 HMOX2P30519 316 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 SEC24CP53992 1094 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 RPS15P62841 145 aaKnown RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 TRAF3Q13114 568 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 FASTKQ14296 549 aaKnown RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 KLHL35Q6PF15 583 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 SUSD1Q6UWL2 747 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 LCTLQ6UWM7 567 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 C17orf64Q86WR6 236 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 OOSP2Q86WS3 158 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 WDR75Q8IWA0 830 aaKnown RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 EFCAB3Q8N7B9 438 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 ZNF781Q8N8C0 355 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 HMGCLL1Q8TB92 370 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 SSC4DQ8WTU2 575 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 MR1Q95460 341 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 MOCOSQ96EN8 888 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 FAR2Q96K12 515 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 MAGEB10Q96LZ2 347 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 CD180Q99467 661 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 MENTQ9BUN1 341 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 CHST8Q9H2A9 424 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 NOL11Q9H8H0 719 aaKnown RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 ZBTB26Q9HCK0 441 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 PRM3Q9NNZ6 103 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 TRPS1Q9UHF7 1281 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 BTRCQ9Y297 605 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-208ENST00000437607 FIS1Q9Y3D6 152 aa11.6□□□□□ -0.55
PTPRF-208ENST00000437607 SVILO95425 2214 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 CROCCQ5TZA2 2017 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 GSAPA4D1B5 854 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 E7EQ34 232 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ZBTB11O95625 1053 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ESRRBO95718 433 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 CHRM5P08912 532 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 GNAZP19086 355 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 DRD4P21917 467 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 PSMB5P28074 263 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ARRB2P32121 409 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 RORAP35398 523 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ARL4DP49703 201 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ITGA1P56199 1179 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 IRF8Q02556 426 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ARMC6Q6NXE6 501 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 JMJD6Q6NYC1 403 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 MILR1Q7Z6M3 343 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 TMEM126BQ8IUX1 230 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 HOMEZQ8IX15 550 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 DSELQ8IZU8 1212 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 C2orf73Q8N5S3 287 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 RBMXL3Q8N7X1 1067 aaKnown RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ENDOVQ8N8Q3 282 aaKnown RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 LINC01555Q8NAE3 123 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 FDCSPQ8NFU4 85 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 OR4E2Q8NGC2 313 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 OR52B6Q8NGF0 335 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 PIWIL2Q8TC59 973 aaKnown RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 SLC5A11Q8WWX8 675 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 SLC22A18Q96BI1 424 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 LRFN5Q96NI6 719 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 NRTNQ99748 197 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 SIKE1Q9BRV8 207 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 NUDT9Q9BW91 350 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ACAT2Q9BWD1 397 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 SLC29A3Q9BZD2 475 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 C20orf27Q9GZN8 174 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ZNF395Q9H8N7 513 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-208ENST00000437607 NPHS2Q9NP85 383 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 LUZP4Q9P127 313 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 HAO1Q9UJM8 370 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 CNTRLQ7Z7A1 2325 aa11.59□□□□□ -0.55
PTPRF-208ENST00000437607 ABCA12Q86UK0 2595 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 OR6C74A6NCV1 312 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 C2orf74A8MZ97 194 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 ISM1B1AKI9 464 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 MEN1O00255 615 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 MATN2O00339 956 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 OR7A17O14581 309 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 AZIN1O14977 448 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 UGDHO60701 494 aa11.58□□□□□ -0.56
PTPRF-208ENST00000437607 SKAP2O75563 359 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms