RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 FAM92AA1XBS5 289 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 TSPAN6O43657 245 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 SOCS5O75159 536 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GSTT2P0CG29 244 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GSTT2BP0CG30 244 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 CD40LGP29965 261 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 RYKP34925 604 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF763Q0D2J5 394 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF181Q2M3W8 571 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 XKR7Q5GH72 579 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 MORN1Q5T089 497 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 IER5LQ5T953 404 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 CPZQ66K79 652 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GALNT12Q8IXK2 581 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 CHCHD4Q8N4Q1 142 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 OR9Q2Q8NGE9 314 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 LKAAEAR1Q8TD35 194 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 TP53INP1Q96A56 240 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 FERD3LQ96RJ6 166 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 SLC22A4Q9H015 551 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 RNF208Q9H0X6 261 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 ACOT13Q9NPJ3 140 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 CFAP20Q9Y6A4 193 aaKnown RBP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 OR6C70A6NIJ9 312 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 PI15O43692 258 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 PRMT3O60678 531 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 SLITRK5O94991 958 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 STATHP02808 62 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 ADH1AP07327 375 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 BMP4P12644 408 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 HOXD12P35452 270 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 CENPAP49450 140 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GRSF1Q12849 480 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GNA13Q14344 377 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 OR6Q1Q8NGQ2 317 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 UBE2FQ969M7 185 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 PRDM8Q9NQV8 689 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GTF2A1LQ9UNN4 478 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 NUP214P35658 2090 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 INPPL1O15357 1258 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 IGLV3-25P01717 112 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 BLVRAP53004 296 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 PNLIPRP1P54315 467 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 RGS8P57771 180 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 RPS26P62854 115 aaKnown RBP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF630Q2M218 657 aaPredicted RBP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 LIPKQ5VXJ0 399 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 THOC7Q6I9Y2 204 aaKnown RBP12.18□□□□□ -0.46
CPNE4-201ENST00000429747 HMGN2P46Q86SG4 172 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 RAD51AP1Q96B01 352 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 REEP4Q9H6H4 257 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 B3GNT3Q9Y2A9 372 aa12.18□□□□□ -0.46
CPNE4-201ENST00000429747 GON4LQ3T8J9 2241 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 STX11O75558 287 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 OXSR1O95747 527 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CH25HO95992 272 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 C8AP07357 584 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 IDUAP35475 653 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 ETV3P41162 512 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 VLDLRP98155 873 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 STX4Q12846 297 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SGCGQ13326 291 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 KIAA1161Q6NSJ0 714 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SBSNQ6UWP8 590 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CEP68Q76N32 757 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 DSG4Q86SJ6 1040 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CDH24Q86UP0 819 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 GPR26Q8NDV2 337 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 FAM46DQ8NEK8 389 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 C11orf24Q96F05 449 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-201ENST00000429747 KCTD7Q96MP8 289 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CNTRLQ7Z7A1 2325 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CLCA1A8K7I4 914 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SCAMP1O15126 338 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CDKN2CP42773 168 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CLCN7P51798 805 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 MTAPQ13126 283 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 KEAP1Q14145 624 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 LIPJQ5W064 366 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 FGD2Q7Z6J4 655 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SLC35G5Q96KT7 338 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 RNF38Q9H0F5 515 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 FBXW2Q9UKT8 454 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SPACA6W5XKT8 324 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 NPIPB15A6NHN6 443 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-201ENST00000429747 ISM1B1AKI9 464 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SSNA1O43805 119 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 ARF5P84085 180 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 TBRG1Q3YBR2 411 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 DESI1Q6ICB0 168 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 SYCE2Q6PIF2 218 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 HUS1BQ8NHY5 278 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 UFD1Q92890 307 aa12.17□□□□□ -0.46
CPNE4-201ENST00000429747 ZBED6CLQ96FA7 236 aaPredicted RBP12.17□□□□□ -0.46
CPNE4-201ENST00000429747 ZNF419Q96HQ0 510 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms