RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 DNASE1L3Q13609 305 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 PWP1Q13610 501 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 ZRSR2Q15696 482 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 HIST2H2ACQ16777 129 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 TTMPQ5BVD1 217 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 TCHHL1Q5QJ38 904 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 GARNL3Q5VVW2 1013 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 MLIPQ5VWP3 458 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 LIPMQ5VYY2 423 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 HIST2H2AA3Q6FI13 130 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 ZCCHC23Q6ZST2 131 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 MILR1Q7Z6M3 343 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 ENDOVQ8N8Q3 282 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 TRPV3Q8NET8 790 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 UTP15Q8TED0 518 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 ZNF473Q8WTR7 871 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 MTFMTQ96DP5 389 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 CCDC126Q96EE4 140 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 MMABQ96EY8 250 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 KCNA7Q96RP8 456 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 CCNL2Q96S94 520 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 GATA5Q9BWX5 397 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 SHCBP1LQ9BZQ2 653 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 RHBGQ9H310 441 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 PRM3Q9NNZ6 103 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 SSU72Q9NP77 194 aaKnown RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 TNFRSF12AQ9NP84 129 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 IFT80Q9P2H3 777 aaPredicted RBP12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 CTSFQ9UBX1 484 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
AC004540.1-205ENST00000420774 WDR91A4D1P6 747 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 LRIT2A6NDA9 550 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 H0YIV9 168 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 SAP18O00422 153 aaKnown RBP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 PRPF4O43172 522 aaKnown RBP eCLIP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 RDH16O75452 317 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 CLEC3AO75596 197 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 OTCP00480 354 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 TGFB1P01137 390 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 BPGMP07738 259 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 SERPINA6P08185 405 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 EMP3P54852 163 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 FOXA1P55317 472 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 OLR1P78380 273 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 LCP2Q13094 533 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 NCF4Q15080 339 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 NDUFA9Q16795 377 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 DEFB134Q4QY38 66 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ATP1A1-AS1Q5TC04 95 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ARHGAP40Q5TG30 622 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 CES4AQ5XG92 561 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ATG14Q6ZNE5 492 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 SHISA6Q6ZSJ9 500 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 FRMD7Q6ZUT3 714 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 CDYL2Q8N8U2 506 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 AMER3Q8N944 861 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 TTLQ8NG68 377 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 OR5T3Q8NGG3 340 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 HUS1BQ8NHY5 278 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 AGAP11Q8TF27 550 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 KIAA1143Q96AT1 154 aaPredicted RBP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 MS4A6EQ96DS6 147 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 F2RL3Q96RI0 385 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ZNF382Q96SR6 550 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 HBEGFQ99075 208 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 DPH2Q9BQC3 489 aaPredicted RBP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 MS4A8Q9BY19 250 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 PITHD1Q9GZP4 211 aaPredicted RBP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 STMN4Q9H169 189 aaPredicted RBP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 OR51B5Q9H339 312 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ACTL8Q9H568 366 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 ZNF304Q9HCX3 659 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 DMRT3Q9NQL9 472 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 FARSBQ9NSD9 589 aaKnown RBP12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 HCN3Q9P1Z3 774 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 MID2Q9UJV3 735 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 EPG5Q9HCE0 2579 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 NBEAQ8NFP9 2946 aa12.03□□□□□ -0.48
AC004540.1-205ENST00000420774 TMEM120BA0PK00 339 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 MAGEB17A8MXT2 336 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 C9J4A7 227 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 ERI3O43414 337 aaKnown RBP12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 TRIM13O60858 407 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 KLHL18O94889 574 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 NSA2O95478 260 aaKnown RBP12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 ETHE1O95571 254 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 SMIM10L1P0DMW3 83 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 ALOX12P18054 663 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 FBLP22087 321 aaKnown RBP12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 ARRB2P32121 409 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 SERPINB4P48594 390 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 PLA2G16P53816 162 aa12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 RPS13P62277 151 aaKnown RBP12.02□□□□□ -0.49
AC004540.1-205ENST00000420774 IL10RAQ13651 578 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms