RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CHST10O43529 356 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 TOXO94900 526 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 SLC35G6P0C7Q6 338 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 CDH1P12830 882 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 CD1EP15812 388 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 NPPBP16860 134 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 MSX1P28360 303 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 PTGS2P35354 604 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 ITGA8P53708 1063 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 DHX34Q14147 1143 aaKnown RBP11.38□□□□□ -0.59
LIMS2-210ENST00000413578 ANKRD22Q5VYY1 191 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 MBOAT1Q6ZNC8 495 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 QSOX2Q6ZRP7 698 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 STRA8Q7Z7C7 330 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 CD163Q86VB7 1156 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 SULF2Q8IWU5 870 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 ZFP62Q8NB50 900 aaPredicted RBP11.38□□□□□ -0.59
LIMS2-210ENST00000413578 OR4K1Q8NGD4 311 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 LILRB4Q8NHJ6 448 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 COQ3Q9NZJ6 369 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 COMMD10Q9Y6G5 202 aa11.38□□□□□ -0.59
LIMS2-210ENST00000413578 TCRBV16S1A1N1A0A5B0 115 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 MAGEB16A2A368 324 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 CTAGE9A4FU28 777 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 B3GALT4O96024 378 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 ALOX12P18054 663 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 TFEBP19484 476 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 JAK1P23458 1154 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 CCND1P24385 295 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 CHRNB4P30926 498 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 MAGEA3P43357 314 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 MEOX1P50221 254 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 BTG2P78543 158 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 SP140Q13342 867 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 NAE1Q13564 534 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 PWP1Q13610 501 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 PHKG1Q16816 387 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 DEFB134Q4QY38 66 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 EMC4Q5J8M3 183 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 DMRTC2Q8IXT2 367 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-210ENST00000413578 LMNTD2Q8IXW0 634 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 AGGF1Q8N302 714 aaeCLIP11.37□□□□□ -0.59
LIMS2-210ENST00000413578 RPRMLQ8N4K4 120 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 APCDD1LQ8NCL9 501 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 ASB5Q8WWX0 329 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 ZNF669Q96BR6 464 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-210ENST00000413578 AARSD1Q9BTE6 412 aaKnown RBP11.37□□□□□ -0.59
LIMS2-210ENST00000413578 ATG10Q9H0Y0 220 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 CCDC68Q9H2F9 335 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 RNF6Q9Y252 685 aa11.37□□□□□ -0.59
LIMS2-210ENST00000413578 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-210ENST00000413578 GTF3C1Q12789 2109 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 ABCA2Q9BZC7 2435 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 TFECO14948 347 aaPredicted RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 NDUFS4O43181 175 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 PEX1O43933 1283 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 HS6ST1O60243 411 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 HAUS5O94927 633 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 FGGP02679 453 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 TPOP07202 933 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 C8GP07360 202 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 MLNP12872 115 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 GRK3P35626 688 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 NR0B1P51843 470 aaKnown RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 OLR1P78380 273 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 MEF2AQ02078 507 aaPredicted RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 DHX9Q08211 1270 aaKnown RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 THOC5Q13769 683 aaKnown RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 TMEM211Q6ICI0 200 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 LRRC8EQ6NSJ5 796 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 NIPAL1Q6NVV3 410 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 KIAA0408Q6ZU52 694 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 CEP128Q6ZU80 1094 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 GSTA5Q7RTV2 222 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 MDGA2Q7Z553 956 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 OR56A3Q8NH54 315 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 NT5CQ8TCD5 201 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 EEF1AKMT1Q8WVE0 214 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 TMEM125Q96AQ2 219 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 PTCHD1Q96NR3 888 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 OR4K3Q96R72 315 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 HAUS8Q9BT25 410 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 TMUB1Q9BVT8 246 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 UCK2Q9BZX2 261 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 SPNS1Q9H2V7 528 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 CLK4Q9HAZ1 481 aaKnown RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 PARVBQ9HBI1 364 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 NECTIN3Q9NQS3 549 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 ZNF223Q9UK11 482 aaPredicted RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 FBXO5Q9UKT4 447 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 PPIEQ9UNP9 301 aaKnown RBP11.36□□□□□ -0.59
LIMS2-210ENST00000413578 CLDN16Q9Y5I7 305 aa11.36□□□□□ -0.59
LIMS2-210ENST00000413578 VPS13CQ709C8 3753 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
LIMS2-210ENST00000413578 TRBC2A0A5B9 178 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 NKX2-6A6NCS4 301 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 SDR42E2A6NKP2 422 aa11.35□□□□□ -0.59
LIMS2-210ENST00000413578 FOXO6A8MYZ6 492 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms