RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 LINGO1Q96FE5 620 aa13.08□□□□□ -0.32
RAB11FIP3-202ENST00000412256 SNF8Q96H20 258 aa13.08□□□□□ -0.32
RAB11FIP3-202ENST00000412256 MS4A14Q96JA4 679 aa13.08□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TRIM54Q9BYV2 358 aa13.08□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PDZD2O15018 2839 aa13.08□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CCDC168Q8NDH2 2452 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 A8MUA0 341 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PRRG2O14669 202 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PRMT3O60678 531 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ZNF888P0CJ79 500 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ZNF24P17028 368 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ALOX12P18054 663 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TPP2P29144 1249 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 SSTR2P30874 369 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CYB561P49447 251 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CDKN2DP55273 166 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 SKP1P63208 163 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 BTG2P78543 158 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RGS1Q08116 209 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 DHX9Q08211 1270 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 SP140Q13342 867 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PWP1Q13610 501 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CSHL1Q14406 222 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 DUPD1Q68J44 220 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ZNF662Q6ZS27 426 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 SIAH3Q8IW03 269 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 LGI4Q8N135 537 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 C2CD4AQ8NCU7 369 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ABHD11Q8NFV4 315 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ELP5Q8TE02 316 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TMEM125Q96AQ2 219 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RHBGQ9H310 441 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 F8P00451 2351 aa13.07□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TACC2O95359 2948 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TRBC2A0A5B9 178 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 NME2P1O60361 137 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 GUCA1CO95843 209 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TSPAN12O95859 305 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 AHSGP02765 367 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 NME2P22392 152 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 GABRB3P28472 473 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 MAGEA3P43357 314 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 IL2P60568 153 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RAB8AP61006 207 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RNFT1Q5M7Z0 435 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CATSPEREQ5SY80 951 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RBM20Q5T481 1227 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ABHD13Q7L211 337 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PPIL6Q8IXY8 311 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 AFAP1L2Q8N4X5 818 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 OR4K1Q8NGD4 311 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CA5BP1Q8WTZ4 195 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CHTF18Q8WVB6 975 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 DEFB126Q9BYW3 111 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PPANQ9NQ55 473 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PPT2Q9UMR5 302 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 NEU2Q9Y3R4 380 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 DCHS2Q6V1P9 2916 aa13.06□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CSMD2Q7Z408 3487 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 E9PLN8 166 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PGAM1P18669 254 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 MAOAP21397 527 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PGGT1BP53609 377 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ITGA8P53708 1063 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 MLF1P58340 268 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 KRTAP10-9P60411 292 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 HYAL2Q12891 473 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 CRYMQ14894 314 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RBBP5Q15291 538 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 EID3Q8N140 333 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 GPATCH11Q8N954 259 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 OR56A3Q8NH54 315 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ATL1Q8WXF7 558 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 SDCCAG3Q96C92 435 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PBKQ96KB5 322 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TSNARE1Q96NA8 513 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 OR4K3Q96R72 315 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 OLFM1Q99784 485 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ZFP69BQ9UJL9 534 aa13.05□□□□□ -0.32
RAB11FIP3-202ENST00000412256 ANKRD17O75179 2603 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 URADA6NGE7 173 aa13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 FCHO1O14526 889 aa13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 TFECO14948 347 aaPredicted RBP13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 BANF1O75531 89 aa13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RNH1P13489 461 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 PTGER1P34995 402 aa13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 RFC3P40938 356 aa13.04□□□□□ -0.32
RAB11FIP3-202ENST00000412256 HLCSP50747 726 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms