RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 NIPAL1Q6NVV3 410 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 GALNT16Q8N428 558 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 TEX9Q8N6V9 391 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 FDCSPQ8NFU4 85 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 OR11G2Q8NGC1 345 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 UTP15Q8TED0 518 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 UBLCP1Q8WVY7 318 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.314e-7■■■■■ 58.1
PDLIM2-206ENST00000409141 MTBPQ96DY7 904 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 WDR34Q96EX3 536 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 MESP1Q9BRJ9 268 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 KLHL31Q9H511 634 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 ANKZF1Q9H8Y5 726 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 GPR83Q9NYM4 423 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF490Q9ULM2 529 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 ANGPTL3Q9Y5C1 460 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 SCN3AQ9NY46 2000 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 IQANK1A0A1B0GTG1 560 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF860A6NHJ4 632 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 ESPNB1AK53 854 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 KLK8O60259 260 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 JRKO75564 520 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 B3GALT4O96024 378 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 PDGFAP04085 211 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 ACPPP15309 386 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 EPB42P16452 691 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 GSTM2P28161 218 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 STXBP1P61764 594 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 AIMP2Q13155 320 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 TBCCQ15814 346 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 TIFABQ6ZNK6 161 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 PRICKLE2Q7Z3G6 844 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 OR5T3Q8NGG3 340 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 C8orf44Q96CB5 159 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 NUDT9Q9BW91 350 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 MLXIPLQ9NP71 852 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 COPG2Q9UBF2 871 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 FETUBQ9UGM5 382 aa16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 TNPO3Q9Y5L0 923 aaKnown RBP16.97■□□□□ 0.31
PDLIM2-206ENST00000409141 FASNP49327 2511 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 ALOX12BO75342 701 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 WFS1O76024 890 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 SLU7O95391 586 aaKnown RBP16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 CD22P20273 847 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 ITGA3P26006 1051 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 CASP2P42575 452 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 NAA30Q147X3 362 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 MINDY4Q4G0A6 757 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 SHISA5Q8N114 240 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 TEX19Q8NA77 164 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 PEX11GQ96HA9 241 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 PRM3Q9NNZ6 103 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 PSMC3IPQ9P2W1 217 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF451Q9Y4E5 1061 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 BOD1L1Q8NFC6 3051 aa16.96■□□□□ 0.31
PDLIM2-206ENST00000409141 LRRC14BA6NHZ5 514 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 PCDH17O14917 1159 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 SUV39H1O43463 412 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 CHST10O43529 356 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 SLC28A2O43868 658 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 DNAJB6O75190 326 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 CLEC3AO75596 197 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 SMIM10L1P0DMW3 83 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 IL10P22301 178 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 SOX8P57073 446 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 KLRB1Q12918 225 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 PCBP2Q15366 365 aaKnown RBP eCLIP16.95■□□□□ 0.39e-7■■■■□ 24.1
PDLIM2-206ENST00000409141 PARP9Q8IXQ6 854 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 PTGR2Q8N8N7 351 aaPredicted RBP16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 METTL21AQ8WXB1 218 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 UBE2E3Q969T4 207 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 SMIM10Q96HG1 83 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 FAR2Q96K12 515 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 MRPL57Q9BQC6 102 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 XPR1Q9UBH6 696 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 TBK1Q9UHD2 729 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 ANAPC2Q9UJX6 822 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 PCDHGB7Q9Y5F8 929 aa16.95■□□□□ 0.3
PDLIM2-206ENST00000409141 LRIT2A6NDA9 550 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 KLHL41O60662 606 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 SMIM24O75264 130 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 SIX3O95343 332 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 HPP00738 406 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 HPDP32754 393 aaPredicted RBP16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 OLR1P78380 273 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 BTN3A2P78410 334 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 PCDH1Q08174 1060 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 E2F2Q14209 437 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 MYBPC3Q14896 1274 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 ADNP2Q6IQ32 1131 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 NDUFAF7Q7L592 441 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 VN1R5Q7Z5H4 357 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 CNPY4Q8N129 248 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 GAL3ST3Q96A11 431 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 MS4A6EQ96DS6 147 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 PHF21BQ96EK2 531 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 OR1F2PQ96R84 312 aa16.94■□□□□ 0.3
PDLIM2-206ENST00000409141 SMAD5Q99717 465 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms