RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 PCSK2P16519 638 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PRSS36Q5K4E3 855 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MED27Q6P2C8 311 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 POP5Q969H6 163 aaKnown RBP17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RHNO1Q9BSD3 238 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 INSL6Q9Y581 213 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CHD9Q3L8U1 2897 aa17.64■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TGFB1P01137 390 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CISD3P0C7P0 127 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HSD3B1P14060 373 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 NPPBP16860 134 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HOXB6P17509 224 aaKnown RBP17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HSD3B2P26439 372 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HTR1BP28222 390 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TIA1P31483 386 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MC1RQ01726 317 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RGNQ15493 299 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZNF852Q6ZMS4 543 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 B3GNT8Q7Z7M8 397 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 VPS37AQ8NEZ2 397 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RAB2BQ8WUD1 216 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 NXPE3Q969Y0 559 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 DTD2Q96FN9 168 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ASPSCR1Q9BZE9 553 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 GABARAPL1Q9H0R8 117 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SIRT5Q9NXA8 310 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 DAPK2Q9UIK4 370 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RABL2BQ9UNT1 228 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 FGF19O95750 216 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 FPR1P21462 350 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PCMT1P22061 227 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ASMTP46597 345 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 C21orf58P58505 322 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ST8SIA6P61647 398 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TOP3AQ13472 1001 aaPredicted RBP17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SLBPQ14493 270 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SMN1Q16637 294 aaKnown RBP17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TRMT11Q7Z4G4 463 aaKnown RBP17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CADM3Q8N126 398 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ATG16L2Q8NAA4 619 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 OR4A15Q8NGL6 344 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZFP90Q8TF47 636 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 UBE2FQ969M7 185 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MAGED4Q96JG8 741 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZFYVE19Q96K21 471 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CHST8Q9H2A9 424 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 OR51B5Q9H339 312 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 KIF17Q9P2E2 1029 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PSME2Q9UL46 239 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 N6AMT1Q9Y5N5 214 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 LRRK1Q38SD2 2015 aa17.63■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PRRT4C9JH25 899 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HOXA9P31269 272 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HPCAL1P37235 193 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 GP2P55259 537 aaKnown RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 EMX1Q04741 257 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SPIN4Q56A73 249 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RAET1GQ6H3X3 334 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CAPN13Q6MZZ7 669 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 NLRP8Q86W28 1048 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 C2orf73Q8N5S3 287 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TTC29Q8NA56 475 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 MUL1Q969V5 352 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 FKBP10Q96AY3 582 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TBC1D20Q96BZ9 403 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 LRIG1Q96JA1 1093 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SPNS1Q9H2V7 528 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 C11orf49Q9H6J7 331 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 REEP1Q9H902 201 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 PALMDQ9NP74 551 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 THUMPD1Q9NXG2 353 aaKnown RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ERVK-18Q9QC07 812 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 GMPPBQ9Y5P6 360 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TCF20Q9UGU0 1960 aaKnown RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 UGT2B11O75310 529 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 BCL10O95999 233 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 OPN1SWP03999 348 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ADH5P11766 374 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 TNFRSF1BP20333 461 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 VIPR2P41587 438 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 IL18R1Q13478 541 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 AQP6Q13520 282 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 VEZF1Q14119 521 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 COX20Q5RI15 118 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CRTC3Q6UUV7 619 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 FBLIM1Q8WUP2 373 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 COQ10AQ96MF6 247 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 BTNL2Q9UIR0 455 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 RANBP2P49792 3224 aaKnown RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 KPNA4O00629 521 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 KIAA0355O15063 1070 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CCDC159P0C7I6 412 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZNF8P17098 575 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 CRATP43155 626 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 HBA1P69905 142 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 IQCCQ4KMZ1 466 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 ZNF658BQ4V348 819 aaPredicted RBP17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 COMMD6Q7Z4G1 85 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 SFTPA1Q8IWL2 248 aa17.62■□□□□ 0.41
CHRFAM7A-202ENST00000397827 KLHDC8AQ8IYD2 350 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms