RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 POU4F3Q15319 338 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 CATSPEREQ5SY80 951 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 TMEM214Q6NUQ4 689 aaKnown RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 AADACL2Q6P093 401 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 ZNF585AQ6P3V2 769 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 PPP1R21Q6ZMI0 780 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 VN1R4Q7Z5H5 301 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 PLD3Q8IV08 490 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 LRRC75A-AS1Q8N1F1 130 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 ZFP62Q8NB50 900 aaPredicted RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 FBXO15Q8NCQ5 510 aaPredicted RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 SLC35B2Q8TB61 432 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 ALG3Q92685 438 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 THAP11Q96EK4 314 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
NEDD9-203ENST00000397378 BIRC8Q96P09 236 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 PANX2Q96RD6 677 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 TTYH2Q9BSA4 534 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 ETNK1Q9HBU6 452 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 LANCL2Q9NS86 450 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 Q9UFV3 132 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 ZANQ9Y493 2812 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 FREM3P0C091 2139 aa8.8□□□□□ -1
NEDD9-203ENST00000397378 FIGNL2A6NMB9 653 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 NPIPA2E9PIF3 369 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 NPIPA3F8WFD2 350 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 H3BMM5 538 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 H7BY64 318 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 SGK494L7N484 410 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 SMAPO00193 183 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 CBFA2T2O43439 604 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 ACVR2AP27037 513 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 STIP1P31948 543 aaKnown RBP8.79□□□□□ -1
NEDD9-203ENST00000397378 FDFT1P37268 417 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 GRIA1P42261 906 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 ITGA8P53708 1063 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 ADARP55265 1226 aaKnown RBP8.79□□□□□ -1
NEDD9-203ENST00000397378 OR4D2P58180 307 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 KLF1Q13351 362 aaPredicted RBP8.79□□□□□ -1
NEDD9-203ENST00000397378 KLHL38Q2WGJ6 581 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 CTSL3PQ5NE16 218 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 B3GNT6Q6ZMB0 384 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 ADCK2Q7Z695 626 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 CNGA4Q8IV77 575 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 VSTM4Q8IW00 320 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 SULF2Q8IWU5 870 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 LRRC56Q8IYG6 542 aaPredicted RBP8.79□□□□□ -1
NEDD9-203ENST00000397378 KIF2BQ8N4N8 673 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 CAMKVQ8NCB2 501 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 PPFIBP2Q8ND30 876 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 PPHLN1Q8NEY8 458 aaKnown RBP8.79□□□□□ -1
NEDD9-203ENST00000397378 OR5M9Q8NGP3 310 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 ZNF480Q8WV37 535 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 TM4SF19Q96DZ7 209 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 LRRC46Q96FV0 321 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 PRAP1Q96NZ9 151 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 PKP4Q99569 1192 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 FAM129AQ9BZQ8 928 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 ANKHQ9HCJ1 492 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 PNPLA3Q9NST1 481 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 TREX1Q9NSU2 369 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 TMEM184CQ9NVA4 438 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 TFR2Q9UP52 801 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 PCDHA13Q9Y5I0 950 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 SLC22A7Q9Y694 548 aa8.79□□□□□ -1
NEDD9-203ENST00000397378 SONP18583 2426 aaKnown RBP8.78□□□□□ -1
NEDD9-203ENST00000397378 SYCE3A1L190 88 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 TUBAL3A6NHL2 446 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 CLCA1A8K7I4 914 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 FCHO1O14526 889 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PEX1O43933 1283 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 NIPSNAP2O75323 286 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 RDH16O75452 317 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 CDC123O75794 336 aaPredicted RBP8.78□□□□□ -1
NEDD9-203ENST00000397378 STATHP02808 62 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 ESR1P03372 595 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 GLI4P10075 376 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 MEF2AQ02078 507 aaPredicted RBP8.78□□□□□ -1
NEDD9-203ENST00000397378 DMTNQ08495 405 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 TYSND1Q2T9J0 566 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 GXYLT1Q4G148 440 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 ACSBG2Q5FVE4 666 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PCID2Q5JVF3 399 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 RNF187Q5TA31 235 aaPredicted RBP8.78□□□□□ -1
NEDD9-203ENST00000397378 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PAOXQ6QHF9 649 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PRSS57Q6UWY2 283 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PDSS2Q86YH6 399 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 OR52N2Q8NGI0 321 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 LPGAT1Q92604 370 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 SLCO2A1Q92959 643 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 TSLPQ969D9 159 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PERPQ96FX8 193 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 PEX11GQ96HA9 241 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 TCF12Q99081 682 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 YIPF4Q9BSR8 244 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 DEFB127Q9H1M4 99 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 CHRAC1Q9NRG0 131 aa8.78□□□□□ -1
NEDD9-203ENST00000397378 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
NEDD9-203ENST00000397378 ARID1AO14497 2285 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms