RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GTF3C1Q12789 2109 aa8.24□□□□□ -1.09
CAPN3-208ENST00000397204 HEATR5BQ9P2D3 2071 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 GABRR3A8MPY1 467 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 GOLGA8KD6RF30 607 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 GOLGA8TH3BQL2 631 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 EIF3FO00303 357 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 NDC80O14777 642 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 NEURL1O76050 574 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 TSPAN12O95859 305 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 SYF2O95926 243 aaKnown RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 PAMP19021 973 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 TPSB2P20231 275 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 ZNF75DP51815 510 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 BASP1P80723 227 aaKnown RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 MPP1Q00013 466 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 TLE4Q04727 773 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 KCNJ11Q14654 390 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 RPS6KA1Q15418 735 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 CDSNQ15517 529 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 TPSAB1Q15661 275 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 KRTAP21-3Q3LHN1 58 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 SFT2D3Q587I9 215 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 KIAA0930Q6ICG6 404 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 NIPAL1Q6NVV3 410 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 PAPD4Q6PIY7 484 aaKnown RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 GSTA5Q7RTV2 222 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 GALNTL5Q7Z4T8 443 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 RPS19BP1Q86WX3 136 aaKnown RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 PRELID2Q8N945 189 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 POGLUT1Q8NBL1 392 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 PPFIBP2Q8ND30 876 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 AGAP11Q8TF27 550 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 CA5BP1Q8WTZ4 195 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 MAIP1Q8WWC4 291 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 SLC13A3Q8WWT9 602 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 KCNJ9Q92806 393 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 CCDC138Q96M89 665 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 OR1F2PQ96R84 312 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 DMRTA2Q96SC8 542 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 NPAS2Q99743 824 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 TREX2Q9BQ50 279 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 CCDC68Q9H2F9 335 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 CDCP1Q9H5V8 836 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 TRIM45Q9H8W5 580 aaPredicted RBP8.23□□□□□ -1.09
CAPN3-208ENST00000397204 ABCF3Q9NUQ8 709 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 SYBUQ9NX95 663 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 COQ3Q9NZJ6 369 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 LRFN1Q9P244 771 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 ZKSCAN5Q9Y2L8 839 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 COMMD10Q9Y6G5 202 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 SCN2AQ99250 2005 aa8.23□□□□□ -1.09
CAPN3-208ENST00000397204 CACNA1CQ13936 2221 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 ANKHD1Q8IWZ3 2542 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 FAM237BA0A1B0GVD1 139 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CTAGE9A4FU28 777 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 OR2W5A6NFC9 320 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 TGFBR3LH3BV60 316 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 SGK494L7N484 410 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 ADAM10O14672 748 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 FANCGO15287 622 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 LCMT2O60294 686 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 HOXB4P17483 251 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 IL1RNP18510 177 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 IMPA1P29218 277 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 GRK3P35626 688 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CYB561P49447 251 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 OR4D2P58180 307 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CSNK1G2P78368 415 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 RHAGQ02094 409 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 THOC5Q13769 683 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 USP10Q14694 798 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 ABRAXAS2Q15018 415 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 HERC3Q15034 1050 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 SIX1Q15475 284 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 MAPKAPK3Q16644 382 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CAPN13Q6MZZ7 669 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 MEX3BQ6ZN04 569 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 UBE2R2Q712K3 238 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 PRSS41Q7RTY9 318 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 ASPGQ86U10 573 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CDH24Q86UP0 819 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 SLC26A11Q86WA9 606 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CHERPQ8IWX8 916 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 LMNTD2Q8IXW0 634 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 KCT2Q8NC54 265 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 ELP5Q8TE02 316 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 SDCCAG3Q96C92 435 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 MACROD1Q9BQ69 325 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 HES7Q9BYE0 225 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CLK4Q9HAZ1 481 aaKnown RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 CCDC177Q9NQR7 707 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-208ENST00000397204 LANCL2Q9NS86 450 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 HOMER3Q9NSC5 361 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 ANKRD10Q9NXR5 420 aa8.22□□□□□ -1.09
CAPN3-208ENST00000397204 HCN3Q9P1Z3 774 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms