RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 C7orf57Q8NEG2 295 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CEP295NLQ96MC4 621 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CITED4Q96RK1 184 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 CCM2Q9BSQ5 444 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 ASAH2Q9NR71 780 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 GULP1Q9UBP9 304 aa15.55■□□□□ 0.08
PCDH1-203ENST00000394536 MRPS7Q9Y2R9 242 aaKnown RBP15.55■□□□□ 0.08
PCDH1-203ENST00000394536 GABRR3A8MPY1 467 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 CASKO14936 926 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 CBSLP0DN79 551 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 PTNP21246 168 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 CBSP35520 551 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 LIPAP38571 399 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 MAPK12P53778 367 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 MGAT3Q09327 533 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 GPAT3Q53EU6 434 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 CACTIN-AS1Q8N1I8 211 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 GFM1Q96RP9 751 aaKnown RBP15.54■□□□□ 0.08
PCDH1-203ENST00000394536 ASPNQ9BXN1 380 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 MROQ9BYG7 248 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 TLX2O43763 284 aaPredicted RBP15.54■□□□□ 0.08
PCDH1-203ENST00000394536 PCDH8O95206 1070 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 IL12RB1P42701 662 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 SLC14A1Q13336 389 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 C22orf39Q6P5X5 142 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 P2RY12Q9H244 342 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 HCN4Q9Y3Q4 1203 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 SPIN1Q9Y657 262 aaPredicted RBP15.54■□□□□ 0.08
PCDH1-203ENST00000394536 J3KTA2 159 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 RTCAO00442 366 aaKnown RBP15.54■□□□□ 0.08
PCDH1-203ENST00000394536 NME6O75414 186 aaPredicted RBP15.54■□□□□ 0.08
PCDH1-203ENST00000394536 GABARAPO95166 117 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 KCNK5O95279 499 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 GDPD4Q6W3E5 623 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 MSRB3Q8IXL7 192 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 FAM83FQ8NEG4 500 aaPredicted RBP15.54■□□□□ 0.08
PCDH1-203ENST00000394536 TANKQ92844 425 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 FATE1Q969F0 183 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 SLC30A2Q9BRI3 323 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 SLC12A9Q9BXP2 914 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 PLAGL1Q9UM63 463 aa15.54■□□□□ 0.08
PCDH1-203ENST00000394536 FABP12A6NFH5 140 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CLCA1A8K7I4 914 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 SLC16A6O15403 523 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CA12O43570 354 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 KLK8O60259 260 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 ACPPP15309 386 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 SLC35A2P78381 396 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 INAVAQ3KP66 663 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 PLET1Q6UQ28 207 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 MACC1Q6ZN28 852 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 C10orf111Q8N326 155 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 C1QTNF3Q9BXJ4 246 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 NEK6Q9HC98 313 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 RPRD1BQ9NQG5 326 aaKnown RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 B3GNT3Q9Y2A9 372 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 UGT2B17O75795 530 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 SULT1C4O75897 302 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 GSTM4Q03013 218 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 RGNQ15493 299 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CRTC2Q53ET0 693 aaPredicted RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CATSPEREQ5SY80 951 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 TRIM46Q7Z4K8 759 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 METTL3Q86U44 580 aaKnown RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CD99L2Q8TCZ2 262 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 SCRN2Q96FV2 425 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CNDP2Q96KP4 475 aaKnown RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 ZCCHC2Q9C0B9 1178 aaKnown RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 C5AR2Q9P296 337 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 MAPRE3Q9UPY8 281 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 GSTK1Q9Y2Q3 226 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 SNTNA6NMZ2 147 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 PSIP1O75475 530 aaKnown RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CDRT1O95170 752 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CAPNS1P04632 268 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 ALPPL2P10696 532 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 TCEA1P23193 301 aaKnown RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CD83Q01151 205 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 OXA1LQ15070 435 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CTF1Q16619 201 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 CLEC12AQ5QGZ9 265 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 LIPKQ5VXJ0 399 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 KRT78Q8N1N4 520 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 KAT2AQ92830 837 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 MAGEB10Q96LZ2 347 aaPredicted RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 KLHL1Q9NR64 748 aa15.53■□□□□ 0.08
PCDH1-203ENST00000394536 DNMT3AQ9Y6K1 912 aaPredicted RBP15.53■□□□□ 0.08
PCDH1-203ENST00000394536 PIPSLA2A3N6 862 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 TLR4O00206 839 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 AOAHP28039 575 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 CNR2P34972 360 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 TIE1P35590 1138 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 GJA8P48165 433 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 KEAP1Q14145 624 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 OR7G3Q8NG95 312 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 GEMIN6Q8WXD5 167 aaKnown RBP15.52■□□□□ 0.08
PCDH1-203ENST00000394536 CIDECQ96AQ7 238 aaPredicted RBP15.52■□□□□ 0.08
PCDH1-203ENST00000394536 EID2BQ96D98 161 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 TBC1D17Q9HA65 648 aa15.52■□□□□ 0.08
PCDH1-203ENST00000394536 UPK1BO75841 260 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms