RNA–Protein interactions for RNA: ENST00000390980.1

RNU6-578P-201, Transcript of RNA, U6 small nuclear 578, pseudogene, humanhuman

BASIC

Gene RNU6-578P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-578P-201ENST00000390980 TECTBQ96PL2 329 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 ALKBH3Q96Q83 286 aaPredicted RBP0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 PAFAH2Q99487 392 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 SEPHS2Q99611 448 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 HSD17B14Q9BPX1 270 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 ITPAQ9BY32 194 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 KCNK13Q9HB14 408 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 POLKQ9UBT6 870 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 SLC12A6Q9UHW9 1150 aa0.77□□□□□ -2.29
RNU6-578P-201ENST00000390980 ARHGAP23Q9P227 1491 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 COL1A2P08123 1366 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 TNRQ92752 1358 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 IGKV2D-24A0A075B6R9 120 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 BCLAF3A2AJT9 711 aaKnown RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 CCT8L1PA6NM43 557 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 FOXI3A8MTJ6 420 aaPredicted RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 A8MVM7 634 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 CD4P01730 458 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 PSG2P11465 335 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 PMELP40967 661 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 FNTAP49354 379 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 KRTAP12-3P60328 96 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 BIRC2Q13490 618 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 CUL3Q13618 768 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 IRF3Q14653 427 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 ABRAXAS2Q15018 415 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 NONOQ15233 471 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 TGIF1Q15583 401 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 ECSCRQ19T08 205 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 VWC2Q2TAL6 325 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 IGSF11Q5DX21 431 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 ZRANB3Q5FWF4 1079 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 SNX30Q5VWJ9 437 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 KRT79Q5XKE5 535 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 REP15Q6BDI9 236 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 ADAMTS16Q8TE57 1224 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 PTPMT1Q8WUK0 201 aaPredicted RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 SNRNP27Q8WVK2 155 aaKnown RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 USP6NLQ92738 828 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 HDAC2Q92769 488 aaKnown RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 SPACA9Q96E40 222 aaPredicted RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 LURAP1Q96LR2 239 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 RCHY1Q96PM5 261 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 CCT8L2Q96SF2 557 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 SLC2A11Q9BYW1 496 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 SLC25A39Q9BZJ4 359 aaPredicted RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 FTOQ9C0B1 505 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 SDCBP2Q9H190 292 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 OSGEPL1Q9H4B0 414 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 GSN-AS1Q9NRJ2 163 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 TMEM9Q9P0T7 183 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 LUZP4Q9P127 313 aa0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 NIP7Q9Y221 180 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 CFAP65Q6ZU64 1925 aaKnown RBP0.76□□□□□ -2.29
RNU6-578P-201ENST00000390980 IL16Q14005 1332 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 IGKV1D-17A0A075B6S4 117 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 LOC390937A0A1W2PQ73 354 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 OR2A25A4D2G3 310 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 LRCOL1A6NCL2 159 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 TRIM49D1C9J1S8 452 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 SAP18O00422 153 aaKnown RBP0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 FBP2O00757 339 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 IGHG3P01860 377 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 RAB40ALP0C0E4 278 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 F3P13726 295 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 TRIM21P19474 475 aaKnown RBP0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 TM4SF1P30408 202 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 AXLP30530 894 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 RPL9P32969 192 aaKnown RBP0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 HMGCLP35914 325 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 ARL3P36405 182 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 FEN1P39748 380 aaKnown RBP0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 LHX1P48742 406 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 NDST1P52848 882 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 EIF5P55010 431 aaKnown RBP0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 CLDN15P56746 228 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 PAX2Q02962 417 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 HSPB3Q12988 150 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 NPTX1Q15818 432 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 OTPQ5XKR4 325 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 ABI3BPQ7Z7G0 1075 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 ZNF547Q8IVP9 402 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 CCDC60Q8IWA6 550 aaPredicted RBP0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 SLC22A18ASQ8N1D0 253 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 CARNMT1Q8N4J0 409 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 RASGEF1AQ8N9B8 481 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 LPGAT1Q92604 370 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 IL22RA2Q969J5 263 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 EXOC4Q96A65 974 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 NXNL1Q96CM4 212 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 C7orf26Q96N11 449 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 ANKRD27Q96NW4 1050 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 NDNQ99608 321 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 LIME1Q9H400 295 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 C3orf14Q9HBI5 128 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 CDH20Q9HBT6 801 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 SLC35C2Q9NQQ7 365 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 PSD3Q9NYI0 1048 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 RNF150Q9ULK6 438 aa0.75□□□□□ -2.29
RNU6-578P-201ENST00000390980 RPS6KL1Q9Y6S9 549 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms