RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SLC9A6Q92581 669 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 C11orf84Q9BUA3 381 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 TTYH1Q9H313 450 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 C12orf4Q9NQ89 552 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 TMEM221A6NGB7 291 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 SYN3O14994 580 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 SULT1C4O75897 302 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 GABARAPO95166 117 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 RLN1P04808 185 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 ETFAP13804 333 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCSK2P16519 638 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 HOXD10P28358 340 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 RGS8P57771 180 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 TAS2R50P59544 299 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 SF1Q15637 639 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 UBXN11Q5T124 520 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 GDF6Q6KF10 455 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 CADM2Q8N3J6 435 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 OR10H4Q8NGA5 316 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 JPH3Q8WXH2 748 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 AP2M1Q96CW1 435 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 OR51V1Q9H2C8 321 aa12.69□□□□□ -0.38
TRAPPC9-201ENST00000389328 TARM1B6A8C7 271 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 MAP2K3P46734 347 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CTU2Q2VPK5 515 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 INAVAQ3KP66 663 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 NRARPQ7Z6K4 114 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 GPR149Q86SP6 731 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 NXPE1Q8N323 547 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 Q8N402 240 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZFP41Q8N8Y5 198 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 DLGAP4Q9Y2H0 992 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CAPNS1P04632 268 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 SLC6A4P31645 630 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 TGFBR1P36897 503 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCDH1Q08174 1060 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 GNA13Q14344 377 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 MARCH8Q5T0T0 291 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 PHC2Q8IXK0 858 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 ARRDC2Q8TBH0 407 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 NCKAP1Q9Y2A7 1128 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 UGT2A1Q9Y4X1 527 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 FZD9O00144 591 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 PQBP1O60828 265 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CPNE6O95741 557 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CNR2P34972 360 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 SOX3P41225 446 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 MLLT10P55197 1068 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 AP1S2P56377 157 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 AQP6Q13520 282 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CPZQ66K79 652 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 AGTRAPQ6RW13 159 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 FAM20CQ8IXL6 584 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 TMEM151AQ8N4L1 468 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 BEND7Q8N7W2 519 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 MDGA1Q8NFP4 955 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 GPR150Q8NGU9 434 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 RFKQ969G6 155 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CCDC32Q9BV29 185 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 BRINP2Q9C0B6 783 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 THG1LQ9NWX6 298 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 OSER1Q9NX31 292 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 UTS2RQ9UKP6 389 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 NEDD8-MDP1E9PL57 170 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 MTHFD2P13995 350 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 CELP19835 753 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 GP2P55259 537 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 PCBP2Q15366 365 aaKnown RBP eCLIP12.68□□□□□ -0.387e-7■■■■■ 29
TRAPPC9-201ENST00000389328 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 OTUD1Q5VV17 481 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 DHRS4L2Q6PKH6 230 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 WRAP53Q9BUR4 548 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 SLITRK2Q9H156 845 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZCCHC3Q9NUD5 404 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 GJD2Q9UKL4 321 aa12.68□□□□□ -0.38
TRAPPC9-201ENST00000389328 GLI3P10071 1580 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 E2F3O00716 465 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 GJB5O95377 273 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 PTNP21246 168 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 BDKRB1P46663 353 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 PSMD8P48556 350 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 DAPP51397 102 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 CRISP1P54107 249 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 PTPRRQ15256 657 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 CEP68Q76N32 757 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 HMGN2P46Q86SG4 172 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 TTC9BQ8N6N2 239 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 TIFAQ96CG3 184 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 DUS3LQ96G46 650 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 MRPL48Q96GC5 212 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 KCNN2Q9H2S1 579 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 ZNF385DQ9H6B1 395 aa12.67□□□□□ -0.38
TRAPPC9-201ENST00000389328 NFKBIL1Q9UBC1 381 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms