RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GOLM1Q8NBJ4 401 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 TRPV3Q8NET8 790 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 GPR156Q8NFN8 814 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 HTRA1Q92743 480 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 TUBA1CQ9BQE3 449 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 SLC6A17Q9H1V8 727 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 PCDHGA11Q9Y5H2 935 aa13.72□□□□□ -0.21
CLCN4-201ENST00000380829 K7EQS6 105 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 ACOX3O15254 700 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 BCAS1O75363 584 aaPredicted RBP13.71□□□□□ -0.21
CLCN4-201ENST00000380829 PAK4O96013 591 aaPredicted RBP13.71□□□□□ -0.21
CLCN4-201ENST00000380829 GGT1P19440 569 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 TAP2Q03519 686 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 ENPP2Q13822 863 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 ZIK1Q3SY52 487 aaPredicted RBP13.71□□□□□ -0.21
CLCN4-201ENST00000380829 AKAP14Q86UN6 197 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 C10orf111Q8N326 155 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.21
CLCN4-201ENST00000380829 TESCQ96BS2 214 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 FUNDC2Q9BWH2 189 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 S1PR5Q9H228 398 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 SMPD3Q9NY59 655 aaPredicted RBP13.71□□□□□ -0.21
CLCN4-201ENST00000380829 INVSQ9Y283 1065 aa13.71□□□□□ -0.21
CLCN4-201ENST00000380829 TRBV5-3A0A0A0MS03 114 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 EIF2S1P05198 315 aaKnown RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 ALDH4A1P30038 563 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 CCT8P50990 548 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 RPS13P62277 151 aaKnown RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 FGL2Q14314 439 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 SLBPQ14493 270 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 GTF2IRD2BQ6EKJ0 949 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 SLC16A12Q6ZSM3 486 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 SLCO6A1Q86UG4 719 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 GTF2IRD2Q86UP8 949 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 FAM9CQ8IZT9 166 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF548Q8NEK5 533 aaPredicted RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 GANCQ8TET4 914 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF486Q96H40 463 aaPredicted RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 FCRL1Q96LA6 429 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 RNF145Q96MT1 663 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 C9orf16Q9BUW7 83 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 MKRN2Q9H000 416 aaKnown RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 RMND5AQ9H871 391 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 ZFR2Q9UPR6 939 aaKnown RBP13.71□□□□□ -0.22
CLCN4-201ENST00000380829 DYRK1BQ9Y463 629 aa13.71□□□□□ -0.22
CLCN4-201ENST00000380829 GSTA4O15217 222 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 RASAL1O95294 804 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 BMP4P12644 408 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 IL7RP16871 459 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 EFNA1P20827 205 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 C5AR1P21730 350 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 SHMT2P34897 504 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 KIR2DL1P43626 348 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 KIR3DL1P43629 444 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 PNLIPRP1P54315 467 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ADAM15Q13444 863 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 IRF4Q15306 451 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 UGT8Q16880 541 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 CCNYL2Q5T2Q4 361 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 MED27Q6P2C8 311 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 LRRTM4Q86VH4 590 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 LRRC56Q8IYG6 542 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ITCHQ96J02 903 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 REXO4Q9GZR2 422 aaKnown RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 KCNH6Q9H252 994 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 SPNS1Q9H2V7 528 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 TRIT1Q9H3H1 467 aaKnown RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 RUVBL1Q9Y265 456 aaKnown RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 A0A096LPI6 279 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 MAN1A2O60476 641 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ERN1O75460 977 aaKnown RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ADH1BP00325 375 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 C1QCP02747 245 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ANXA6P08133 673 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 COX7A2P14406 83 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ACPPP15309 386 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 PRPS1L1P21108 318 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 HTR1BP28222 390 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 RAE1P78406 368 aaKnown RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ZNF33BQ06732 778 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 PCDH1Q08174 1060 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 PYCR3Q53H96 274 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 UBE2UQ5VVX9 321 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 PDZD3Q86UT5 571 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 MUS81Q96NY9 551 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 CPPED1Q9BRF8 314 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 CHID1Q9BWS9 393 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 EPS8L2Q9H6S3 715 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 BRF2Q9HAW0 419 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 CCDC177Q9NQR7 707 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-201ENST00000380829 ITM2CQ9NQX7 267 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 MAN2B2Q9Y2E5 1009 aa13.7□□□□□ -0.22
CLCN4-201ENST00000380829 GPSM3Q9Y4H4 160 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms