RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 GPR42O15529 346 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.01
HMGN1-202ENST00000380747 NDUFS4O43181 175 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 CNOT3O75175 753 aaKnown RBP8.77□□□□□ -1.01
HMGN1-202ENST00000380747 KLF7O75840 302 aaPredicted RBP8.77□□□□□ -1.01
HMGN1-202ENST00000380747 ONECUT2O95948 504 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 RECKO95980 971 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SHBGP04278 402 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 RBP1P09455 135 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SLC35G6P0C7Q6 338 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 FAM87AP0C7U9 286 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 COL6A2P12110 1019 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 CXCR2P25025 360 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 HNF4AP41235 474 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SLCO1A2P46721 670 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 AVPR1BP47901 424 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 POLE2P56282 527 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 OCA2Q04671 838 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SLBPQ14493 270 aaKnown RBP eCLIP8.77□□□□□ -1.01
HMGN1-202ENST00000380747 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 TECRLQ5HYJ1 363 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SLCO4C1Q6ZQN7 724 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 RAB43Q86YS6 212 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 TMEM151BQ8IW70 566 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 PRSS58Q8IYP2 241 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 ALDH16A1Q8IZ83 802 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 KCT2Q8NC54 265 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 OR9A4Q8NGU2 314 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 THAP4Q8WY91 577 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 MVB12AQ96EY5 273 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 GPR78Q96P69 363 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 DRC3Q9H069 523 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SOX17Q9H6I2 414 aaPredicted RBP8.77□□□□□ -1.01
HMGN1-202ENST00000380747 ANKHQ9HCJ1 492 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 XPR1Q9UBH6 696 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 OPTCQ9UBM4 332 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 TRPC4Q9UBN4 977 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 CTSFQ9UBX1 484 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 FETUBQ9UGM5 382 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 TUBD1Q9UJT1 453 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 ASB1Q9Y576 335 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 ANGPTL3Q9Y5C1 460 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SNRNP200O75643 2136 aaKnown RBP8.77□□□□□ -1.01
HMGN1-202ENST00000380747 PRRC2CQ9Y520 2896 aaKnown RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 RP1L1Q8IWN7 2480 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 CCDC189A1A4V9 331 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ARGFXA6NJG6 315 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 FIGNL2A6NMB9 653 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 GOLGA8RI6L899 631 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 K7EPI3 171 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 PEX12O00623 359 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 MAP2K7O14733 419 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ST8SIA5O15466 376 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 FOXS1O43638 330 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SMIM24O75264 130 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 RFPL1O75677 317 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ALBP02768 609 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 MTHFD2P13995 350 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 IL1RNP18510 177 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 HSD17B3P37058 310 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SNRPNP63162 240 aaKnown RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 MAT1AQ00266 395 aaKnown RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 IRF8Q02556 426 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 RGS1Q08116 209 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 CHAF1BQ13112 559 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 CHIT1Q13231 466 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 PWP1Q13610 501 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 FAM53BQ14153 422 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 DOC2AQ14183 400 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SSPNQ14714 243 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 NKG7Q16617 165 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 HIST2H2ACQ16777 129 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SYT16Q17RD7 645 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ERCC6LQ2NKX8 1250 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 TOR1AIP1Q5JTV8 583 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ATG9BQ674R7 924 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 HIST2H2AA3Q6FI13 130 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 WDR93Q6P2C0 686 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 TIFABQ6ZNK6 161 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 KRT78Q8N1N4 520 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ARHGEF39Q8N4T4 335 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 TEX9Q8N6V9 391 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 PTGR2Q8N8N7 351 aaPredicted RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 ANKRD53Q8N9V6 530 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 OR2Y1Q8NGV0 311 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 NT5CQ8TCD5 201 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 STT3BQ8TCJ2 826 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 UBTD2Q8WUN7 234 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 APOBEC4Q8WW27 367 aaKnown RBP8.76□□□□□ -1.01
HMGN1-202ENST00000380747 CCT6BQ92526 530 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 MIEF2Q96C03 454 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 TM4SF19Q96DZ7 209 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 MOCOSQ96EN8 888 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 CRB3Q9BUF7 120 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SARGQ9BW04 601 aa8.76□□□□□ -1.01
HMGN1-202ENST00000380747 SLC26A1Q9H2B4 701 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms