RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CCDC116Q8IYX3 515 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 DGCR14Q96DF8 476 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 MALT1Q9UDY8 824 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 H3BSH0 61 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 EI24O14681 340 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 RPLP0P05388 317 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 AQP4P55087 323 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 MTTPP55157 894 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 MRGPRX2Q96LB1 330 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 TPT1P8Q9HAU6 139 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 TBC1D24Q9ULP9 559 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 A0A1B0GVT2 93 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 ITGA10O75578 1167 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 SCGNO76038 276 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 EPCAMP16422 314 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 C5AR1P21730 350 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 OR3A3P47888 321 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 OR3A2P47893 321 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 RNF144AP50876 292 aaPredicted RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 ABATP80404 500 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 FLYWCH1Q4VC44 716 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
GPC6-201ENST00000377047 SPANXN4Q5MJ08 99 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 PDPRQ8NCN5 879 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 LRCH3Q96II8 777 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 UPB1Q9UBR1 384 aa13.17□□□□□ -0.3
GPC6-201ENST00000377047 ZNF670-ZNF695F2Z2N8 137 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 RNF13O43567 381 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 SEMA4FO95754 770 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 PFKLP17858 780 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 RBMS1P29558 406 aaKnown RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 SMSP52788 366 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 RAB33AQ14088 237 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ARSJQ5FYB0 599 aaPredicted RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 TMEM25Q86YD3 366 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 TOP1MTQ969P6 601 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 AMBNQ9NP70 447 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 OR1A2Q9Y585 309 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 H3BQ06 376 aaPredicted RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 CLRN1P58418 232 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ABCA11PQ4W5N1 156 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 OR4K1Q8NGD4 311 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 OR10Q1Q8NGQ4 319 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 MVB12BQ9H7P6 319 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 TNFRSF10DQ9UBN6 386 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 EFCAB9A8MZ26 197 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 SYT16Q17RD7 645 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 AQP11Q8NBQ7 271 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ORAI3Q9BRQ5 295 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 DEFB126Q9BYW3 111 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 TRIM39Q9HCM9 518 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 A0A1W2PPL8 197 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 MEIS3P2A8K0S8 358 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 TP53I11O14683 189 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 CD70P32970 193 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 C1orf189Q5VU69 101 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 UMODL1-AS1Q8N2C9 162 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 CD180Q99467 661 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ZNF395Q9H8N7 513 aaPredicted RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 PRODH2Q9UF12 536 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 PADI2Q9Y2J8 665 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 A0A1W2PRG6 482 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ZNF217O75362 1048 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 OR2B3O76000 313 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 TSC22D1Q15714 1073 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 OGFOD2Q6N063 350 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 ULK3Q6PHR2 472 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 BORCS5Q969J3 196 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 IL17FQ96PD4 163 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 UCK2Q9BZX2 261 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 MS4A12Q9NXJ0 267 aa13.16□□□□□ -0.3
GPC6-201ENST00000377047 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 ZFR2Q9UPR6 939 aaKnown RBP13.16□□□□□ -0.3
GPC6-201ENST00000377047 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
GPC6-201ENST00000377047 FAM227AF5H4B4 570 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 SCO2O43819 266 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 DNAJB1P25685 340 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 ZNF101Q8IZC7 436 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 RAB8BQ92930 207 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 REEP4Q9H6H4 257 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 FEZF1A0PJY2 475 aa13.15□□□□□ -0.3
GPC6-201ENST00000377047 CSTBP04080 98 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms