RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PFKFB4Q16877 469 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CACHD1Q5VU97 1274 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 FAM131AQ6UXB0 335 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 KIAA1324Q6UXG2 1013 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 NLRP8Q86W28 1048 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 GPALPP1Q8IXQ4 340 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 PROKR1Q8TCW9 393 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CRELD1Q96HD1 420 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 WDFY2Q96P53 400 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 TBL1YQ9BQ87 522 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 NUSAP1Q9BXS6 441 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 PPIL3Q9H2H8 161 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 SLC2A6Q9UGQ3 507 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MAPRE3Q9UPY8 281 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 AAR2Q9Y312 384 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 LINC01553A4QN01 128 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 OR5K4A6NMS3 321 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MYO1GB0I1T2 1018 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MYL12BO14950 172 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 GLUD1P00367 558 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CTSAP10619 480 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MYL12AP19105 171 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CHMP24386 653 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 KIR2DL3P43628 341 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 IKZF1Q13422 519 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 PTPRRQ15256 657 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 SHHQ15465 462 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 ZDHHC21Q8IVQ6 265 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 RYBPQ8N488 228 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 C9orf62Q8N4C0 152 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 STX19Q8N4C7 294 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MRPS31Q92665 395 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 UBE2FQ969M7 185 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 FBXW5Q969U6 566 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 NSUN5Q96P11 429 aaKnown RBP11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CFAP97Q9P2B7 532 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 NEU3Q9UQ49 428 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 CCL26Q9Y258 94 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MAN2B2Q9Y2E5 1009 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 MYOFQ9NZM1 2061 aa11.72□□□□□ -0.53
C9orf3-203ENST00000375315 SMLR1H3BR10 107 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 TBL1XO60907 577 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PPM1BO75688 479 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 ADH1AP07327 375 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 CCR2P41597 374 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 AIF1P55008 147 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 RPP38P78345 283 aaKnown RBP11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PLIN5Q00G26 463 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 CYP4F3Q08477 520 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 KCNC3Q14003 757 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 LAPTM4AQ15012 233 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 TMEM81Q6P7N7 255 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 GPR149Q86SP6 731 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 TMEM150AQ86TG1 271 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 ATG16L2Q8NAA4 619 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
C9orf3-203ENST00000375315 C1orf74Q96LT6 269 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PITX2Q99697 317 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 ZBP1Q9H171 429 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PLCXD1Q9NUJ7 323 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 SPASTQ9UBP0 616 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 GMEB2Q9UKD1 530 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 HCFC2Q9Y5Z7 792 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 LRRC14BA6NHZ5 514 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 CLCA1A8K7I4 914 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 CREG1O75629 220 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 SERPINA1P01009 418 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 RRAS2P62070 204 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-203ENST00000375315 SEMG2Q02383 582 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PTPRCAPQ14761 206 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 GRK1Q15835 563 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 MARC1Q5VT66 337 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 DGLUCYQ7Z3D6 616 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 GPAT4Q86UL3 456 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 ENTHD1Q8IYW4 607 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 APH1BQ8WW43 257 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 TBC1D20Q96BZ9 403 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PYURFQ96I23 114 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 GPR137Q96N19 417 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
C9orf3-203ENST00000375315 PTPRDP23468 1912 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 SLC35F4A4IF30 521 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 PROM1O43490 865 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 IL1RNP18510 177 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 KELP23276 732 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 RORCP51449 518 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 EIF4EBP2Q13542 120 aaPredicted RBP11.71□□□□□ -0.54
C9orf3-203ENST00000375315 POU4F3Q15319 338 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 TPGS2Q68CL5 300 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 OR2T5Q6IEZ7 315 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 MSANTD2Q6P1R3 559 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF367Q7RTV3 350 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 GRASPQ7Z6J2 395 aaPredicted RBP11.71□□□□□ -0.54
C9orf3-203ENST00000375315 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 LAX1Q8IWV1 398 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 CHPFQ8IZ52 775 aa11.71□□□□□ -0.54
C9orf3-203ENST00000375315 NLGN4YQ8NFZ3 816 aaPredicted RBP11.71□□□□□ -0.54
C9orf3-203ENST00000375315 OR2T29Q8NH02 315 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms