RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 VPS4AQ9UN37 437 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 HS3ST3A1Q9Y663 406 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 COLEC10Q9Y6Z7 277 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 IGKV1-8A0A0C4DH67 115 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TRBC2A0A5B9 178 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ARHGAP10A1A4S6 786 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 EIF4E1BA6NMX2 242 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CLOCKO15516 846 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TBX19O60806 448 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 DEAF1O75398 565 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SEMA4FO95754 770 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ABCB1P08183 1280 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SRFP11831 508 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GSTM2P28161 218 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CHN2P52757 468 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TAS2R50P59544 299 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TXNL4AP83876 142 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C2orf80Q0P641 193 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TPRG1LQ5T0D9 272 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 C6orf52Q5T4I8 152 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ENPP6Q6UWR7 440 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PAGE2Q7Z2X7 111 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CHERPQ8IWX8 916 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZZZ3Q8IYH5 903 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 EID3Q8N140 333 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CBR4Q8N4T8 237 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TTLQ8NG68 377 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MAFAQ8NHW3 353 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZFP90Q8TF47 636 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NCLNQ969V3 563 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PPCDCQ96CD2 204 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 QRFPRQ96P65 431 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 XKR8Q9H6D3 395 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 UBE2ZQ9H832 354 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TPT1P8Q9HAU6 139 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SH3BP4Q9P0V3 963 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 DLGAP2Q9P1A6 1054 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PDP2Q9P2J9 529 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OAZ3Q9UMX2 235 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 V9GYQ6 96 aa17.23■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ARHGEF17Q96PE2 2063 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 H0Y8X5 98 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CLEC3AO75596 197 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CCNDBP1O95273 360 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 KCNK5O95279 499 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 BSGP35613 385 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 VMACQ2NL98 169 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NHSL2Q5HYW2 709 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FAM86B1Q8N7N1 296 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TMEM145Q8NBT3 493 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FBXO30Q8TB52 745 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SLC47A1Q96FL8 570 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CHST8Q9H2A9 424 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 POLMQ9NP87 494 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 AASDHPPTQ9NRN7 309 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TBC1D29Q9UFV1 150 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 EBF1Q9UH73 591 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ADAM29Q9UKF5 820 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CA5BQ9Y2D0 317 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 AK5Q9Y6K8 562 aa17.22■□□□□ 0.35
HLA-DQB1-201ENST00000374943 FEZF1A0PJY2 475 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 MAN2B1O00754 1011 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CAPN5O15484 640 aaPredicted RBP17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GPR37L1O60883 481 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GBAP04062 536 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 CCR5P51681 352 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 GAB1Q13480 694 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NKG7Q16617 165 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 PTOV1Q86YD1 416 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SYNPOQ8N3V7 929 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 OR4A15Q8NGL6 344 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 NETO1Q8TDF5 533 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 HMGB4Q8WW32 186 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 ZNF764Q96H86 408 aaPredicted RBP17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 SARGQ9BW04 601 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 TMEM184CQ9NVA4 438 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 UBAP1Q9NZ09 502 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 AP1M2Q9Y6Q5 423 aa17.21■□□□□ 0.35
HLA-DQB1-201ENST00000374943 UPK1AO00322 258 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DLGAP1O14490 977 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NDUFS4O43181 175 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR1F1O43749 312 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PRKD3O94806 890 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 IL3P08700 152 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PEBP1P30086 187 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SHMT2P34897 504 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DGKEP52429 567 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CYP4F2P78329 520 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MC1RQ01726 317 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 VEZF1Q14119 521 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CCNYL2Q5T2Q4 361 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR52E8Q6IFG1 317 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CARM1Q86X55 608 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NATD1Q8N6N6 113 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CREB3L4Q8TEY5 395 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RGMAQ96B86 450 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 F2RL3Q96RI0 385 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NTN4Q9HB63 628 aa17.2■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC6A20Q9NP91 592 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms