RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 C19orf48Q6RUI8 117 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-207ENST00000373573 CAMKMTQ7Z624 323 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 TMEM173Q86WV6 379 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-207ENST00000373573 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 VRK3Q8IV63 474 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 MMAAQ8IVH4 418 aaKnown RBP12.65□□□□□ -0.38
HDAC8-207ENST00000373573 NPAS3Q8IXF0 933 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 APCDD1Q8J025 514 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 CLIP4Q8N3C7 705 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 DBF4BQ8NFT6 615 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 C9orf43Q8TAL5 461 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-207ENST00000373573 PIK3R3Q92569 461 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 C11orf24Q96F05 449 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-207ENST00000373573 METTL2AQ96IZ6 378 aaKnown RBP12.65□□□□□ -0.38
HDAC8-207ENST00000373573 AGAP4Q96P64 663 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 TPK1Q9H3S4 243 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 RLIMQ9NVW2 624 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 FBXL12Q9NXK8 326 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
HDAC8-207ENST00000373573 GABRR3A8MPY1 467 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 APOA1P02647 267 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 TCEA1P23193 301 aaKnown RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SOX6P35712 828 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 ASMTP46597 345 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SMAD3P84022 425 aaKnown RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 TPRG1Q6ZUI0 275 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 NLGN4XQ8N0W4 816 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 LGI4Q8N135 537 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 NAGSQ8N159 534 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CYP4Z2PQ8N1L4 340 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 Q8N9G6 341 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 NUAK2Q9H093 628 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 ATG10Q9H0Y0 220 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 TP63Q9H3D4 680 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 MAPRE3Q9UPY8 281 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CFL2Q9Y281 166 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 TET1Q8NFU7 2136 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 KRT87PA6NCN2 255 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 PCDH7O60245 1069 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 IGSF6O95976 241 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 DNTTP04053 509 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 HLA-EP13747 358 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 RPL17P18621 184 aaKnown RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SERPINA4P29622 427 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CRISP3P54108 245 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CDH12P55289 794 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 RAE1P78406 368 aaKnown RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SPIBQ01892 262 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SEMG2Q02383 582 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 EXOC3L2Q2M3D2 409 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 TIMM50Q3ZCQ8 353 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 IFI44LQ53G44 452 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 PLEKHS1Q5SXH7 462 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 C1orf53Q5VUE5 145 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 LRRC66Q68CR7 880 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 B3GNT7Q8NFL0 401 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 UTP15Q8TED0 518 aaKnown RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 BCL7CQ8WUZ0 217 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 MTERF1Q99551 399 aaKnown RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SDHCQ99643 169 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CCM2Q9BSQ5 444 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CCDC32Q9BV29 185 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 BBS2Q9BXC9 721 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 CDCA4Q9BXL8 241 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 ITM2CQ9NQX7 267 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 IMPAD1Q9NX62 359 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 MS4A12Q9NXJ0 267 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 SPATA7Q9P0W8 599 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 DUSP12Q9UNI6 340 aa12.64□□□□□ -0.39
HDAC8-207ENST00000373573 A0A075B6Q4 140 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 EFCAB10A6NFE3 127 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 STK25O00506 426 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 ZW10O43264 779 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 KIAA0513O60268 411 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 ZNF821O75541 412 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-207ENST00000373573 CCNKO75909 580 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 HSMCR30P0CW71 290 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 HSD3B1P14060 373 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 TNFRSF1BP20333 461 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 IDSP22304 550 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 HSD3B2P26439 372 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 OR1D2P34982 312 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 COPZ1P61923 177 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 CYP4F2P78329 520 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 TLE2Q04725 743 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 PLD1Q13393 1074 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
HDAC8-207ENST00000373573 ELOAQ14241 798 aaKnown RBP12.63□□□□□ -0.39
HDAC8-207ENST00000373573 SF1Q15637 639 aaKnown RBP12.63□□□□□ -0.39
HDAC8-207ENST00000373573 XKR6Q5GH73 641 aa12.63□□□□□ -0.39
HDAC8-207ENST00000373573 RSBN1Q5VWQ0 802 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms