RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 CCDC149Q6ZUS6 474 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 VTCN1Q7Z7D3 282 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 LGI4Q8N135 537 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 ARL14EPQ8N8R7 260 aaPredicted RBP10.48□□□□□ -0.73
LCN2-202ENST00000372998 FAM46DQ8NEK8 389 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 OR4C15Q8NGM1 316 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 NR4A3Q92570 626 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 GGHQ92820 318 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 DNASE1L2Q92874 299 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 HPS1Q92902 700 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 SH3KBP1Q96B97 665 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 PPCDCQ96CD2 204 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 QRFPRQ96P65 431 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 FEVQ99581 238 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 P2RY13Q9BPV8 354 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 CCM2Q9BSQ5 444 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 RRAGCQ9HB90 399 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 PRM3Q9NNZ6 103 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 RASSF1Q9NS23 344 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 EXD2Q9NVH0 621 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 TMCC3Q9ULS5 477 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 MGAT4BQ9UQ53 548 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 PCDHGA2Q9Y5H1 932 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 INSL5Q9Y5Q6 135 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 ENPP4Q9Y6X5 453 aa10.48□□□□□ -0.73
LCN2-202ENST00000372998 HELZP42694 1942 aaKnown RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 GABRR3A8MPY1 467 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 NT5C1B-RDH14C9J2C7 533 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 CCRL2O00421 344 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 TOR1BO14657 336 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 DYRK3O43781 588 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 TNFRSF21O75509 655 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 GADD45GO95257 159 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 ADAP00813 363 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 CXCL10P02778 98 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 LCKP06239 509 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 CKMP06732 381 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 ARAFP10398 606 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 LAMP1P11279 417 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 LAG3P18627 525 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 UQCRC2P22695 453 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 NR4A1P22736 598 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 ITPKAP23677 461 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 CHI3L1P36222 383 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 CRATP43155 626 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 RGS6P49758 472 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 LSM3P62310 102 aaKnown RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 CDK6Q00534 326 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 SP3Q02447 781 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 PPP1R8Q12972 351 aaKnown RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 C1DQ13901 141 aaKnown RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 PDE7AQ13946 482 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 NCF4Q15080 339 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 PTPRRQ15256 657 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 ARMCX4Q5H9R4 360 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 DGKKQ5KSL6 1271 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 ANKRD34AQ69YU3 496 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 RTL10Q7L3V2 364 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 TSPAN33Q86UF1 283 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 TAGAPQ8N103 731 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 OR6K2Q8NGY2 324 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 NUDT8Q8WV74 236 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 BTN2A2Q8WVV5 523 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 APH1BQ8WW43 257 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 ZNF514Q96K75 400 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 EGLN2Q96KS0 407 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 TRNT1Q96Q11 434 aaKnown RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 CTRCQ99895 268 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 HEPHQ9BQS7 1158 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 EBPLQ9BY08 206 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 NLNQ9BYT8 704 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 C6orf62Q9GZU0 229 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 ARMC7Q9H6L4 198 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 LTB4R2Q9NPC1 389 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 CCDC177Q9NQR7 707 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 ABCB10Q9NRK6 738 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 TAS2R9Q9NYW1 312 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 SPG21Q9NZD8 308 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 NDUFAF4Q9P032 175 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 SPATA7Q9P0W8 599 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 STOX2Q9P2F5 926 aaPredicted RBP10.47□□□□□ -0.73
LCN2-202ENST00000372998 DKK3Q9UBP4 350 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 B4GALT6Q9UBX8 382 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 SRRDQ9UH36 339 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 IFT52Q9Y366 437 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
LCN2-202ENST00000372998 SNTNA6NMZ2 147 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 M0R082 166 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 MAN1A2O60476 641 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 ZNF821O75541 412 aaPredicted RBP10.46□□□□□ -0.73
LCN2-202ENST00000372998 DLGAP3O95886 979 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 IFNW1P05000 195 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 KRT8P05787 483 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.73
LCN2-202ENST00000372998 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms