RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 OR4K3Q96R72 315 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 PRPF18Q99633 342 aaKnown RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 TUBA8Q9NY65 449 aaPredicted RBP13.53□□□□□ -0.24
LDB3-204ENST00000372066 FAM8A1Q9UBU6 413 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 USP22Q9UPT9 525 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 CORO2BQ9UQ03 480 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 COQ6Q9Y2Z9 468 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 GMEB1Q9Y692 573 aa13.53□□□□□ -0.24
LDB3-204ENST00000372066 PLXND1Q9Y4D7 1925 aa13.52□□□□□ -0.24
LDB3-204ENST00000372066 FAM149AA5PLN7 773 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 H3BNH8 94 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 EI24O14681 340 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 MMP20O60882 483 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 CBFA2T3O75081 653 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 CER1O95813 267 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 IGLV3-19P01714 112 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 RPN2P04844 631 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 TACR1P25103 407 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 PTPN6P29350 595 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 HPCAL1P37235 193 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 CAPGP40121 348 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 GZMMP51124 257 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 TBPL1P62380 186 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 PHC1P78364 1004 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 COL9A2Q14055 689 aaPredicted RBP13.52□□□□□ -0.25
LDB3-204ENST00000372066 MYBPC3Q14896 1274 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 AGERQ15109 404 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 HIST2H2ACQ16777 129 aaPredicted RBP13.52□□□□□ -0.25
LDB3-204ENST00000372066 HLA-BQ31612 363 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 HIST2H2AA3Q6FI13 130 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 GALNT18Q6P9A2 607 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 BORAQ6PGQ7 559 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 DNAJC14Q6Y2X3 702 aaPredicted RBP13.52□□□□□ -0.25
LDB3-204ENST00000372066 SLCO6A1Q86UG4 719 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 LAS2Q8IYD9 372 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 CFAP206Q8IYR0 622 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 DHRSXQ8N5I4 330 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 OR7G3Q8NG95 312 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 ZNF480Q8WV37 535 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 NCSTNQ92542 709 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 SLC47A1Q96FL8 570 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 VPS50Q96JG6 964 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
LDB3-204ENST00000372066 PIF1Q9H611 641 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 PRSS16Q9NQE7 514 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 TM7SF3Q9NS93 570 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
LDB3-204ENST00000372066 ATXN10Q9UBB4 475 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 GULP1Q9UBP9 304 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 DNAJB9Q9UBS3 223 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 BTNL2Q9UIR0 455 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 PCOLCE2Q9UKZ9 415 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 FADS3Q9Y5Q0 445 aa13.52□□□□□ -0.25
LDB3-204ENST00000372066 A0A1B0GVT2 93 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 DLGAP1O14490 977 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 SCAMP2O15127 329 aaKnown RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 CREG1O75629 220 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 C1GALT1C1LP0DN25 315 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 COX7A2P14406 83 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 ZNF23P17027 643 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 ACADLP28330 430 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 PDHA2P29803 388 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 HSD17B2P37059 387 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 CSNK1EP49674 416 aaKnown RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 METAP1P53582 386 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 PLIN5Q00G26 463 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 BNC1Q01954 994 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 BIRC2Q13490 618 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 CCSMST1Q4G0I0 132 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 ANXA8L1Q5VT79 327 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 IYDQ6PHW0 289 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 GCNT7Q6ZNI0 430 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 PDZD3Q86UT5 571 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 SYTL1Q8IYJ3 562 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 OXR1Q8N573 874 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 ZFP28Q8NHY6 868 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 CHTF18Q8WVB6 975 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 REXO4Q9GZR2 422 aaKnown RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 IKZF5Q9H5V7 419 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 CLK4Q9HAZ1 481 aaKnown RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 CCDC177Q9NQR7 707 aaPredicted RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 SAMD4AQ9UPU9 718 aaKnown RBP13.51□□□□□ -0.25
LDB3-204ENST00000372066 ZZEF1O43149 2961 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 PCDH15Q96QU1 1955 aa13.51□□□□□ -0.25
LDB3-204ENST00000372066 AKAP13Q12802 2813 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 PDLIM1O00151 329 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 FPGTO14772 594 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 POP7O75817 140 aaKnown RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 CCNDBP1O95273 360 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 ADH1BP00325 375 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 TFAP2AP05549 437 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 ZNF883P0CG24 379 aa13.5□□□□□ -0.25
LDB3-204ENST00000372066 ZNF8P17098 575 aaPredicted RBP13.5□□□□□ -0.25
LDB3-204ENST00000372066 KELP23276 732 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms