RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CNR2P34972 360 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 ARPC4P59998 168 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 SCARB2Q14108 478 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 SPATS1Q496A3 300 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 ZMAT1Q5H9K5 638 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 RPS26P11Q5JNZ5 115 aaPredicted RBP10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 ZNF551Q7Z340 670 aaPredicted RBP10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 GALNT7Q86SF2 657 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 GALNT12Q8IXK2 581 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 CFAP206Q8IYR0 622 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 TCEANCQ8N8B7 351 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 CTRCQ99895 268 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 SLIRPQ9GZT3 109 aaKnown RBP10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 LINC00597Q9H2U6 94 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 PLAGL1Q9UM63 463 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 B3GNT3Q9Y2A9 372 aa10.63□□□□□ -0.71
NECTIN4-201ENST00000368012 TNS1Q9HBL0 1735 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 TRBC2A0A5B9 178 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 GABRR3A8MPY1 467 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 RFX3P48380 749 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 UGT8Q16880 541 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 IFI44LQ53G44 452 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 CLEC12AQ5QGZ9 265 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 IRAK1BP1Q5VVH5 260 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 THOC6Q86W42 341 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 RAB43Q86YS6 212 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 EXOSC8Q96B26 276 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 ZDHHC4Q9NPG8 344 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PDCD11Q14690 1871 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 NYNRINQ9P2P1 1898 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 A0A1B0GVC2 190 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 CCDC182A6NF36 153 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 A6NIN4 97 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 NEDD8-MDP1E9PL57 170 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PROX2Q3B8N5 592 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 MORN1Q5T089 497 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 USP30Q70CQ3 517 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 OTOP2Q7RTS6 562 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 DNAJB7Q7Z6W7 309 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 GPR151Q8TDV0 419 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 CSGALNACT1Q8TDX6 532 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 ZNF300Q96RE9 604 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 SLC30A2Q9BRI3 323 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 DUSP21Q9H596 190 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 TBC1D17Q9HA65 648 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 MRPS7Q9Y2R9 242 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 IFT52Q9Y366 437 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 OR6C70A6NIJ9 312 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 FAM25AB3EWG3 89 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 FAM25CB3EWG5 89 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 FAM25GB3EWG6 89 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 RFXAPO00287 272 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 SLC16A6O15403 523 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 TLX2O43763 284 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PLOD3O60568 738 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PSMA1P25786 263 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 CD70P32970 193 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 EIF2DP41214 584 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PIK3CBP42338 1070 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PPM1FP49593 454 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 RNF144AP50876 292 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 TAS2R50P59544 299 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 SRSF11Q05519 484 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 DBPQ10586 325 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 TARDBPQ13148 414 aaKnown RBP eCLIP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 IQCCQ4KMZ1 466 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 ZNF517Q6ZMY9 492 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 GDPD3Q7L5L3 318 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 MMAAQ8IVH4 418 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 FAM9CQ8IZT9 166 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 IPCEF1Q8WWN9 437 aaPredicted RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 CLP1Q92989 425 aaKnown RBP10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PHOX2BQ99453 314 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 QPCTLQ9NXS2 382 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 B4GALT6Q9UBX8 382 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 IL20RAQ9UHF4 553 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PEX16Q9Y5Y5 336 aa10.62□□□□□ -0.71
NECTIN4-201ENST00000368012 PIKFYVEQ9Y2I7 2098 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SAGE2PA6NJ88 616 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CLCA1A8K7I4 914 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 EIF3FO00303 357 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ADAMDEC1O15204 470 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 DYRK3O43781 588 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 WBP4O75554 376 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ERAL1O75616 437 aaKnown RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 BCHEP06276 602 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 HLA-EP13747 358 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CD6P30203 668 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 ETV3P41162 512 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 MLLT1Q03111 559 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 RING1Q06587 406 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 BCL2A1Q16548 175 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SYT6Q5T7P8 510 aaPredicted RBP10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 SYCE2Q6PIF2 218 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 AGTRAPQ6RW13 159 aa10.61□□□□□ -0.71
NECTIN4-201ENST00000368012 CRTC1Q6UUV9 634 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms