RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 ANKEF1Q9NU02 776 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 BLOC1S4Q9NUP1 217 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 GTSE1Q9NYZ3 720 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 EMC3Q9P0I2 261 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 B4GALT7Q9UBV7 327 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 TEKT2Q9UIF3 430 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 SH3BGRL2Q9UJC5 107 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 TSPAN16Q9UKR8 245 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 POMT2Q9UKY4 750 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 HPCAL4Q9UM19 191 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 GMEB1Q9Y692 573 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 STYXL1Q9Y6J8 313 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 CCDC171Q6TFL3 1326 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 PCDH11YQ9BZA8 1340 aa1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 ROCK2O75116 1388 aaKnown RBP1.81□□□□□ -2.12
RNU4-42P-201ENST00000364738 IGHV4-30-2A0A087WSY4 118 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 LRRD1A4D1F6 860 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ANKUB1A6NFN9 424 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 TMEM221A6NGB7 291 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 OR6C65A6NJZ3 312 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SHISA7A6NL88 538 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CCDC169A6NNP5 214 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RSPH10B2B2RC85 870 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 UBXN8O00124 270 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SGK1O00141 431 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 AP3B1O00203 1094 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CACNB4O00305 520 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 NVLO15381 856 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 TEX28O15482 410 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RNF113AO15541 343 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 PHF1O43189 567 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SLC7A4O43246 635 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ATP8B1O43520 1251 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SPOPO43791 374 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 AHCYL1O43865 530 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 GALR3O60755 368 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 DKC1O60832 514 aaKnown RBP eCLIP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RTN2O75298 545 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ATP6V1G1O75348 118 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 GFPT2O94808 682 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 TGDSO95455 350 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 OLFM2O95897 454 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ECDO95905 644 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 MT-ND3P03897 115 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 OPN1MWP04001 364 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RSPH10BP0C881 870 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 OPN1MW2P0DN77 364 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 OPN1MW3P0DN78 364 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 PRKAR1AP10644 381 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RPL35AP18077 110 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ARF4P18085 180 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 POLR2EP19388 210 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 KLK2P20151 261 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 S100A1P23297 94 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CHMP24386 653 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 PTPN3P26045 913 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CTNNA2P26232 953 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RANBP1P43487 201 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SLC9A3P48764 834 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SULT1E1P49888 294 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CLNS1AP54105 237 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 DSTNP60981 165 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 B2MP61769 119 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 TPM4P67936 248 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 IRX4P78413 519 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 AP1B1Q10567 949 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CETN1Q12798 172 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 DYNC1I2Q13409 638 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 MAPRE2Q15555 327 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 STK11Q15831 433 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 FAM189A2Q15884 450 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CCDC57Q2TAC2 916 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 WSCD2Q2TBF2 565 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 MS4A18Q3C1V0 323 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CCDC153Q494R4 210 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CFAP221Q4G0U5 840 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 FHL5Q5TD97 284 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 FAM180BQ6P0A1 224 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 NEK5Q6P3R8 708 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CENPQQ7L2Z9 268 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 TIPARPQ7Z3E1 657 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 BNIPLQ7Z465 357 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 PPP1R42Q7Z4L9 355 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 LDB1Q86U70 411 aaPredicted RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 GRAMD2AQ8IUY3 354 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 FBXO39Q8N4B4 442 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 IQUBQ8NA54 791 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 XXYLT1Q8NBI6 393 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ZNF540Q8NDQ6 660 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 KLHL30-AS1Q8NEE0 82 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 DYDC1Q8WWB3 177 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SHC3Q92529 594 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 HDAC2Q92769 488 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 RBM41Q96IZ5 413 aaKnown RBP1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 SPATA17Q96L03 361 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 ATP6V1G3Q96LB4 118 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CGREF1Q99674 301 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 LPAR4Q99677 370 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 TSG101Q99816 390 aa1.8□□□□□ -2.12
RNU4-42P-201ENST00000364738 CCT7Q99832 543 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms