RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TRA2AQ13595 282 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 GRB14Q14449 540 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 GTDC1Q4AE62 458 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 FGD3Q5JSP0 725 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 STPG1Q5TH74 334 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 ARHGEF16Q5VV41 709 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM53AQ6NSI3 398 aaPredicted RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 B3GLCTQ6Y288 498 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 MACC1Q6ZN28 852 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 C15orf52Q6ZUT6 534 aaKnown RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 APLFQ8IW19 511 aaPredicted RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 DCUN1D3Q8IWE4 304 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNF444Q8N0Y2 327 aaPredicted RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 LSMEM2Q8N112 164 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 THEM5Q8N1Q8 247 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SMYD1Q8NB12 490 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SIDT2Q8NBJ9 832 aaKnown RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 RNF149Q8NC42 400 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 OR5AP2Q8NGF4 316 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 OR10G8Q8NGN5 311 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 URGCPQ8TCY9 931 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNRF4Q8WWF5 429 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SEPT8Q92599 483 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 ULK4Q96C45 1275 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 LURAP1Q96LR2 239 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNF560Q96MR9 790 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 GUCD1Q96NT3 240 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 RUFY1Q96T51 708 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 NKX3-1Q99801 234 aaPredicted RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM213AQ9BRX8 229 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 TDRD1Q9BXT4 1180 aaKnown RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 DPEP2Q9H4A9 486 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 KCNMB3Q9NPA1 279 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC52A3Q9NQ40 469 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 TSPAN16Q9UKR8 245 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 NCKAP1Q9Y2A7 1128 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 RPH3AQ9Y2J0 694 aaPredicted RBP3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 C2CD2Q9Y426 696 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 COLEC10Q9Y6Z7 277 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 KIAA1217Q5T5P2 1943 aa3.3□□□□□ -1.88
RNU6-28P-201ENST00000362378 IGHV4-4A0A075B6R2 117 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRBV4-1A0A0J9YWV2 114 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 RNF103-CHMP3A0A140T963 221 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC15A5A6NIM6 579 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 NKX6-3A6NJ46 265 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNF732B4DXR9 585 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLCO1B7G3V0H7 640 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM72CH0Y354 149 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TLR4O00206 839 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 RNF103O00237 685 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 MLNRO43193 412 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRMUO75648 421 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CDC123O75794 336 aaPredicted RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ALPPP05187 535 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CD48P09326 243 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ALPPL2P10696 532 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CPA3P15088 417 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 RPL35AP18077 110 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 AHCYP23526 432 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 NR0B1P51843 470 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 LUMP51884 338 aaPredicted RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 KRTAP10-11P60412 298 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 SP3Q02447 781 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 GFPT1Q06210 699 aaPredicted RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 GPR50Q13585 617 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ITGA9Q13797 1035 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 GK2Q14410 553 aaPredicted RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 SMC1AQ14683 1233 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 DUSP5Q16690 384 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM72AQ5TYM5 149 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 PLPP4Q5VZY2 271 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZNF776Q68DI1 518 aaPredicted RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TCEAL6Q6IPX3 200 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM72DQ6L9T8 149 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC27A4Q6P1M0 643 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CYP4V2Q6ZWL3 525 aaPredicted RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 BTN2A1Q7KYR7 527 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 MIER3Q7Z3K6 550 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TRMT11Q7Z4G4 463 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 FAM72BQ86X60 149 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 FBXW8Q8N3Y1 598 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 HDDC3Q8N4P3 179 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TEX26Q8N6G2 289 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 MRPL43Q8N983 215 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 GPRC5AQ8NFJ5 357 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 KIAA1524Q8TCG1 905 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CD99L2Q8TCZ2 262 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 SLC13A3Q8WWT9 602 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TMEM190Q8WZ59 177 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 HAS2Q92819 552 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CASP10Q92851 521 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TMEM186Q96B77 213 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 NEDD4LQ96PU5 975 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 EPYCQ99645 322 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 CCM2Q9BSQ5 444 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 LRRC2Q9BYS8 371 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ABCG8Q9H221 673 aa3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 ZCCHC3Q9NUD5 404 aaKnown RBP3.29□□□□□ -1.88
RNU6-28P-201ENST00000362378 TMOD3Q9NYL9 352 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms