RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SELPLGQ14242 412 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 TGFBIQ15582 683 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF77Q15935 545 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 KCNMB1Q16558 191 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 SIGIRRQ6IA17 410 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 C8orf82Q6P1X6 216 aaPredicted RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 BHLHB9Q6PI77 547 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ISLR2Q6UXK2 745 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAM122BQ7Z309 247 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CCDC91Q7Z6B0 441 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 TADA2BQ86TJ2 420 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 IQCA1Q86XH1 822 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 SNX31Q8N9S9 440 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 MNS1Q8NEH6 495 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 LPIN2Q92539 896 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 LRRC45Q96CN5 670 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ELMOD3Q96FG2 381 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RAB3IPQ96QF0 476 aaPredicted RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CPNE1Q99829 537 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 SEMA4CQ9C0C4 833 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR2AG1Q9H205 316 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CATSPERBQ9H7T0 1116 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 FANCEQ9HB96 536 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CROTQ9UKG9 612 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMCO1Q9UM00 188 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NOX1Q9Y5S8 564 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 MAPK8IP3Q9UPT6 1336 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 HECTD4Q9Y4D8 3996 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NOTCH4Q99466 2003 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 C15orf65H3BRN8 121 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NR5A2O00482 541 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RNMTO43148 476 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 PRDM1O75626 825 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 BCAR3O75815 825 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 HAUS5O94927 633 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CGAP01215 116 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 VIMP08670 466 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ANKRD34CP0C6C1 535 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZDHHC11BP0C7U3 371 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 DLATP10515 647 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ICAM2P13598 275 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NKX2-1P43699 371 aaPredicted RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 GABRA4P48169 554 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RAB28P51157 221 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NDST1P52848 882 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CABP4P57796 275 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 PRAMEP78395 509 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 HSD11B2P80365 405 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RIGQ13278 110 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 MICAQ29983 383 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 AKNAD1Q5T1N1 836 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NIPAL3Q6P499 406 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 LINC00336Q6ZUF6 198 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 Q6ZUG5 572 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 DPPA4Q7L190 304 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RNF113BQ8IZP6 322 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 BEST3Q8N1M1 668 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF397Q8NF99 534 aaPredicted RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 OR5M1Q8NGP8 315 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ACTL9Q8TC94 416 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ATL1Q8WXF7 558 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ARNTL2Q8WYA1 636 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 PNPLA2Q96AD5 504 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 SPSB1Q96BD6 273 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 PNKPQ96T60 521 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ASCL2Q99929 193 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 KIFC3Q9BVG8 833 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 HRH4Q9H3N8 390 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAIMQ9NVQ4 179 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 OSER1Q9NX31 292 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 COQ3Q9NZJ6 369 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 KIAA1257Q9ULG3 409 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZNF148Q9UQR1 794 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 AP4B1Q9Y6B7 739 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 TRAV26-1A0A087WT03 109 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 A0A0J9YVX5 310 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CPED1A4D0V7 1026 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 PMPCBO75439 489 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 VAPBO95292 243 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 SLU7O95391 586 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CD160O95971 181 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 MCM3P25205 808 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RPS5P46782 204 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 LHX1P48742 406 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ARRB1P49407 418 aaPredicted RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 SOX10P56693 466 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CRYZQ08257 329 aaKnown RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 BST1Q10588 318 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ABRQ12979 859 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 ZBTB17Q13105 803 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 RGS21Q2M5E4 152 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 MIIPQ5JXC2 388 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 LCE5AQ5TCM9 118 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 DCAF12L2Q5VW00 463 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 NUDT13Q86X67 352 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 AMER2Q8N7J2 671 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 BEND7Q8N7W2 519 aaPredicted RBP1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 FAM81AQ8TBF8 368 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 CCDC110Q8TBZ0 833 aa1.72□□□□□ -2.13
SMARCAD1-202ENST00000359052 TMEM163Q8TC26 289 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms