RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PSKH1P11801 424 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ITGA2P17301 1181 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 RGS6P49758 472 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 AP1S1P61966 158 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CDK6Q00534 326 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TARDBPQ13148 414 aaKnown RBP eCLIP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 DOC2AQ14183 400 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 LRIT3Q3SXY7 679 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GPRC6AQ5T6X5 926 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ANXA8L1Q5VT79 327 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TTC23LQ6PF05 361 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CD300LGQ6UXG3 332 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 BCDIN3DQ7Z5W3 292 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 VRK3Q8IV63 474 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CELF5Q8N6W0 485 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ASCC1Q8N9N2 400 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GPR151Q8TDV0 419 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ASZ1Q8WWH4 475 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PIK3R3Q92569 461 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 MRPS31Q92665 395 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TMEM169Q96HH4 297 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 NEDD4LQ96PU5 975 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 P2RY13Q9BPV8 354 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 HTATIP2Q9BUP3 242 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 NLNQ9BYT8 704 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 STARD7Q9NQZ5 370 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ABCB8Q9NUT2 735 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GABRQQ9UN88 632 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ANGPT4Q9Y264 503 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 POFUT2Q9Y2G5 429 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PCDHB11Q9Y5F2 797 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GON4LQ3T8J9 2241 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 FAM240BA0A1B0GVZ2 78 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF840PA6NDX5 716 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GRXCR2A6NFK2 248 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 METTL15A6NJ78 407 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 KPNA3O00505 521 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 AP3D1O14617 1153 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GUCY1B2O75343 617 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SLITRK5O94991 958 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 KLK1P06870 262 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GABRR2P28476 465 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CCND3P30281 292 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TIE1P35590 1138 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 NNMTP40261 264 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SRP54P61011 504 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SCN1BQ07699 218 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 HNRNPA0Q13151 305 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 UGT8Q16880 541 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CRTC2Q53ET0 693 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TJAP1Q5JTD0 557 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PNCKQ6P2M8 343 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GDPD3Q7L5L3 318 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF683Q8IZ20 524 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CMTM8Q8IZV2 173 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SOCS4Q8WXH5 440 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CIDECQ96AQ7 238 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 EXOSC8Q96B26 276 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PKMYT1Q99640 499 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TBC1D17Q9HA65 648 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PDFQ9HBH1 243 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SMURF1Q9HCE7 757 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SEMA3GQ9NS98 782 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 MRPS7Q9Y2R9 242 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PCDHGA6Q9Y5G7 932 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PARP14Q460N5 1801 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GSAPA4D1B5 854 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TLR4O00206 839 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 HAT1O14929 419 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 AREL1O15033 823 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TLX2O43763 284 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SLC28A2O43868 658 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 KLK8O60259 260 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 BCHEP06276 602 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CDK1P06493 297 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 AMD1P17707 334 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 TNFSF8P32971 234 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PPM1FP49593 454 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 UGT2B15P54855 530 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 MANFP55145 182 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 CNTN1Q12860 1018 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 IL18Q14116 193 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GBX1Q14549 363 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 LYPLAL1Q5VWZ2 237 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 AGTRAPQ6RW13 159 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 Q6ZVL8 140 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 Q6ZVU0 165 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 SHFQ7M4L6 423 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 MMAAQ8IVH4 418 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 KLHDC8BQ8IXV7 354 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 GHDCQ8N2G8 530 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 ELMOD1Q8N336 334 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 IQCF1Q8N6M8 205 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 PCSK9Q8NBP7 692 aaKnown RBP6.33□□□□□ -1.4
CSDE1-203ENST00000358528 DNAJB8Q8NHS0 232 aa6.33□□□□□ -1.4
CSDE1-203ENST00000358528 WFDC5Q8TCV5 224 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms