RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 AIPO00170 330 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 GTPBP1O00178 669 aaKnown RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 IFRD1O00458 451 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 CRYBB2P43320 205 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 OSTNP61366 133 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 SLC6A3Q01959 620 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 AP5B1Q2VPB7 878 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 HSD17B13Q7Z5P4 300 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 SLC51AQ86UW1 340 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 SLC44A2Q8IWA5 706 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 ADGRF3Q8IZF5 1079 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 CLDN22Q8N7P3 220 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 PTGR2Q8N8N7 351 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 IL31RAQ8NI17 732 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 GANCQ8TET4 914 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 CENPIQ92674 756 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 MRPL48Q96GC5 212 aaKnown RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 CINPQ9BW66 212 aaPredicted RBP15.18■□□□□ 0.02
RTN3-205ENST00000356000 MND1Q9BWT6 205 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 IKZF5Q9H5V7 419 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 UCK1Q9HA47 277 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 PFDN2Q9UHV9 154 aa15.18■□□□□ 0.02
RTN3-205ENST00000356000 LRRC14BA6NHZ5 514 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SGK494L7N484 410 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 GFRA2O00451 464 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 WNT10BO00744 389 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 PDCD5O14737 125 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 HRGP04196 525 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 ADRB1P08588 477 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SFNP31947 248 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SWI5Q1ZZU3 235 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 HES5Q5TA89 166 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 CD276Q5ZPR3 534 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 NAPEPLDQ6IQ20 393 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 C12orf29Q8N999 325 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SCMH1Q96GD3 660 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SLC38A2Q96QD8 506 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 RAD18Q9NS91 495 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SEC14L4Q9UDX3 406 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SLC22A7Q9Y694 548 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 A0A1B0GTL3 188 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SLC28A1O00337 649 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SCG5P05408 212 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 NMBP08949 121 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 DNASE1P24855 282 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 NNMTP40261 264 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 INO80DQ53TQ3 878 aaPredicted RBP15.17■□□□□ 0.02
RTN3-205ENST00000356000 ESRP1Q6NXG1 681 aaKnown RBP15.17■□□□□ 0.02
RTN3-205ENST00000356000 PAQR7Q86WK9 346 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 MCATQ8IVS2 390 aaKnown RBP15.17■□□□□ 0.02
RTN3-205ENST00000356000 EIF4E3Q8N5X7 224 aaKnown RBP15.17■□□□□ 0.02
RTN3-205ENST00000356000 OR10Q1Q8NGQ4 319 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 TSPAN17Q96FV3 270 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 MNTQ99583 582 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 B3GAT2Q9NPZ5 323 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 SH3BP4Q9P0V3 963 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 EPHA6Q9UF33 1036 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 PADI2Q9Y2J8 665 aa15.17■□□□□ 0.02
RTN3-205ENST00000356000 FNDC1Q4ZHG4 1894 aaPredicted RBP15.17■□□□□ 0.02
RTN3-205ENST00000356000 TCRBV16S1A1N1A0A5B0 115 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 CILPO75339 1184 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 STBD1O95210 358 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 IL1AP01583 271 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 EDN1P05305 212 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 LPLP06858 475 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ACAA1P09110 424 aaPredicted RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 PXNP49023 591 aaPredicted RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 SMSP52788 366 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 RPL6Q02878 288 aaKnown RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 CRYZQ08257 329 aaKnown RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 MTMR1Q13613 665 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 DSG2Q14126 1118 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 HFEQ30201 348 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 APOBEC3HQ6NTF7 200 aaKnown RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 GPR153Q6NV75 609 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 Q6ZPB1 254 aaPredicted RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 KANSL1Q7Z3B3 1105 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ZNF605Q86T29 641 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ASPGQ86U10 573 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 C12orf40Q86WS4 652 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 TP53INP2Q8IXH6 220 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 UXS1Q8NBZ7 420 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 OR6P1Q8NGX9 317 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 ZNF768Q9H5H4 540 aaKnown RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 CDCP1Q9H5V8 836 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 PTPRHQ9HD43 1115 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 WISP3O95389 354 aaPredicted RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 APOC3P02656 99 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 PFKMP08237 780 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ADRA2AP08913 450 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 HBQ1P09105 142 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 SMIM6P0DI80 62 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 GABRB1P18505 474 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 MADCAM1Q13477 382 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 PTPRCAPQ14761 206 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ZNF528Q3MIS6 628 aa15.16■□□□□ 0.02
RTN3-205ENST00000356000 ZNF648Q5T619 568 aaPredicted RBP15.16■□□□□ 0.02
RTN3-205ENST00000356000 SPRYD7Q5W111 196 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms