RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RTCAO00442 366 aaKnown RBP14.88□□□□□ -0.03
CTSA-202ENST00000354880 SIGLEC6O43699 453 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 PRMT3O60678 531 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 LRATO95237 230 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 IL6P05231 212 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 SLC35G6P0C7Q6 338 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 NQO1P15559 274 aaKnown RBP14.88□□□□□ -0.03
CTSA-202ENST00000354880 ENGP17813 658 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 BSGP35613 385 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 GPLD1P80108 840 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 RGS1Q08116 209 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 PWP1Q13610 501 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 NR0B2Q15466 257 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 FAM174BQ3ZCQ3 159 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 NKAIN2Q5VXU1 208 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 C16orf89Q6UX73 402 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 FAM92BQ6ZTR7 304 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 RNF44Q7L0R7 432 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 UBE3DQ7Z6J8 389 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 ASPGQ86U10 573 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 RETREG3Q86VR2 466 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 GFM2Q969S9 779 aaKnown RBP14.88□□□□□ -0.03
CTSA-202ENST00000354880 TESCQ96BS2 214 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 MS4A6EQ96DS6 147 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 TM4SF19Q96DZ7 209 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 ZDHHC12Q96GR4 267 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 QRFPRQ96P65 431 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 TGM7Q96PF1 710 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 RAB3IPQ96QF0 476 aaPredicted RBP14.88□□□□□ -0.03
CTSA-202ENST00000354880 MAP3K3Q99759 626 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 SORBS1Q9BX66 1292 aaKnown RBP14.88□□□□□ -0.03
CTSA-202ENST00000354880 AICDAQ9GZX7 198 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 KLHL31Q9H511 634 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 GPR179Q6PRD1 2367 aa14.88□□□□□ -0.03
CTSA-202ENST00000354880 RP1P56715 2156 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 ASPDHA6ND91 283 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 TLCD2A6NGC4 264 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 SLC9B1P1A6NJY1 282 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 KHNYNO15037 678 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 CFLARO15519 480 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 DUX1O43812 170 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 PCDHGA12O60330 932 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 EEDO75530 441 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 PGRP06401 933 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 TPP2P29144 1249 aaPredicted RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 DGKQP52824 942 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 PLA2G16P53816 162 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 GFERP55789 205 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 C21orf58P58505 322 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 STXBP1P61764 594 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 HKDC1Q2TB90 917 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 TOR1AIP1Q5JTV8 583 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 SPANXN4Q5MJ08 99 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 FRMPD2BQ6IN97 320 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 NUDT13Q86X67 352 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 DEFB107AQ8IZN7 70 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 SRFBP1Q8NEF9 429 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 NT5CQ8TCD5 201 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 STARD8Q92502 1023 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 RERGQ96A58 199 aaPredicted RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 C17orf62Q9BQA9 187 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 SLC6A16Q9GZN6 736 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 LHX9Q9NQ69 397 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 MAP10Q9P2G4 905 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 LEF1Q9UJU2 399 aaPredicted RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 MAPRE3Q9UPY8 281 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 UNC13CQ8NB66 2214 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 ARHGAP10A1A4S6 786 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 ERI3O43414 337 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 B4GAT1O43505 415 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 AKAP10O43572 662 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 KIF1CO43896 1103 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 PNLIPP16233 465 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 ARFIP1P53367 373 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 ATXN3P54252 364 aaPredicted RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 TLR1Q15399 786 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 DPY19L1Q2PZI1 675 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 AMZ1Q400G9 498 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 CCNYL2Q5T2Q4 361 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 OR4C11Q6IEV9 310 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 HACD2Q6Y1H2 254 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 MINDY1Q8N5J2 469 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 EID2Q8N6I1 236 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 Q8N9G6 341 aaPredicted RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 CAMKVQ8NCB2 501 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 OR2L5Q8NG80 312 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.87□□□□□ -0.032e-6■■■□□ 18.8
CTSA-202ENST00000354880 C16orf78Q8WTQ4 265 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 UTP4Q969X6 686 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 CCDC74AQ96AQ1 378 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 ROPN1LQ96C74 230 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 KCNC2Q96PR1 638 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 CD180Q99467 661 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 MMADHCQ9H3L0 296 aaPredicted RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 DDX31Q9H8H2 851 aaKnown RBP14.87□□□□□ -0.03
CTSA-202ENST00000354880 ADAM29Q9UKF5 820 aa14.87□□□□□ -0.03
CTSA-202ENST00000354880 LOC105369274A0A096LPK9 316 aa14.86□□□□□ -0.03
CTSA-202ENST00000354880 LY6G6EA0A0G2JKS1 128 aa14.86□□□□□ -0.03
CTSA-202ENST00000354880 LOC102723532A0A0G2JNH3 316 aa14.86□□□□□ -0.03
CTSA-202ENST00000354880 H0YGG7 62 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms