RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 SSR3Q9UNL2 185 aa12.78□□□□□ -0.36
IFT88-202ENST00000351808 PPIEQ9UNP9 301 aaKnown RBP12.78□□□□□ -0.36
IFT88-202ENST00000351808 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.36
IFT88-202ENST00000351808 TCRBV16S1A1N1A0A5B0 115 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 CCNDBP1O95273 360 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 STAU1O95793 577 aaKnown RBP12.77□□□□□ -0.36
IFT88-202ENST00000351808 B3GALT4O96024 378 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 ANXA3P12429 323 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 IL18Q14116 193 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 MICAQ29983 383 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 TMEM107Q6UX40 140 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 ANKRD46Q86W74 232 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 TTC16Q8NEE8 873 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 SMG7Q92540 1137 aaKnown RBP12.77□□□□□ -0.36
IFT88-202ENST00000351808 INTS12Q96CB8 462 aaKnown RBP12.77□□□□□ -0.36
IFT88-202ENST00000351808 CXorf58Q96LI9 332 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 SERPINB11Q96P15 392 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 ESRP2Q9H6T0 727 aaKnown RBP12.77□□□□□ -0.36
IFT88-202ENST00000351808 MINDY3Q9H8M7 445 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 ANKRA2Q9H9E1 313 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 EMC7Q9NPA0 242 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 COA4Q9NYJ1 87 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 MAP3K20Q9NYL2 800 aaKnown RBP12.77□□□□□ -0.36
IFT88-202ENST00000351808 HCN3Q9P1Z3 774 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 STUB1Q9UNE7 303 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 KCTD3Q9Y597 815 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.36
IFT88-202ENST00000351808 SCN9AQ15858 1988 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 PPEF2O14830 753 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 INPPL1O15357 1258 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 MMP20O60882 483 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 APOC1P02654 83 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 HOXB6P17509 224 aaKnown RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 SCNN1AP37088 669 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 GEMP55040 296 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 ZNF91Q05481 1191 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 SF3A2Q15428 464 aaKnown RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 UGT8Q16880 541 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 SLC39A12Q504Y0 691 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 ZNF628Q5EBL2 1059 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 C22orf42Q6IC83 251 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 MOB2Q70IA6 237 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 LUZP2Q86TE4 346 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 PDZD3Q86UT5 571 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 CCDC117Q8IWD4 279 aaPredicted RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 KLHDC8BQ8IXV7 354 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 DENND6BQ8NEG7 585 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 OR4F6Q8NGB9 312 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 OR9Q1Q8NGQ5 310 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 KIAA1191Q96A73 305 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 HSH2DQ96JZ2 352 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 RPRD1AQ96P16 312 aaPredicted RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 ZIC5Q96T25 663 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 CPPED1Q9BRF8 314 aaPredicted RBP12.77□□□□□ -0.37
IFT88-202ENST00000351808 TMEM43Q9BTV4 400 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 SLC29A3Q9BZD2 475 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 DPY30Q9C005 99 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 RLIMQ9NVW2 624 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 COPZ2Q9P299 210 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 DPP7Q9UHL4 492 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 FAM50BQ9Y247 325 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 SCN1AP35498 2009 aa12.77□□□□□ -0.37
IFT88-202ENST00000351808 TRAV6A0A075B6T7 132 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 TRBV5-3A0A0A0MS03 114 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 HYKKA2RU49 373 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 HPGDSO60760 199 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 CBX7O95931 251 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 TXNP10599 105 aaKnown RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 SLC2A3P11169 496 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 ITGB7P26010 798 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 STOMP27105 288 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 SDC2P34741 201 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 SLC14A1Q13336 389 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 LIPKQ5VXJ0 399 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 PLAG1Q6DJT9 500 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 PDE12Q6L8Q7 609 aaKnown RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 CORO6Q6QEF8 472 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 PAQR3Q6TCH7 311 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 HSDL2Q6YN16 418 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 GDPGP1Q6ZNW5 385 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 OVCH2Q7RTZ1 564 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 DDX53Q86TM3 631 aaKnown RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 FOXJ1Q92949 421 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 CREB3L1Q96BA8 519 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 TPD52L3Q96J77 140 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 INPP5KQ9BT40 448 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 PITHD1Q9GZP4 211 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 NXF3Q9H4D5 531 aaKnown RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 FNDC1Q4ZHG4 1894 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 F8W810 466 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 DNASE2O00115 360 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 TOXO94900 526 aa12.76□□□□□ -0.37
IFT88-202ENST00000351808 HAPLN1P10915 354 aaPredicted RBP12.76□□□□□ -0.37
IFT88-202ENST00000351808 CHRNA5P30532 468 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms