RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ALOX12P18054 663 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 TAC1P20366 129 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 CRHR1P34998 444 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 CCR10P46092 362 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 RAB8AP61006 207 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 KLC1Q07866 573 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 DEFB134Q4QY38 66 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 TOR1AIP1Q5JTV8 583 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 GRHL2Q6ISB3 625 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 MED27Q6P2C8 311 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 RPS27LQ71UM5 84 aaKnown RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 LAPTM4BQ86VI4 370 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 RAB43Q86YS6 212 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 MYLK4Q86YV6 388 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 C4orf33Q8N1A6 199 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 SEC16BQ96JE7 1060 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 NSUN5Q96P11 429 aaKnown RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 BBC3Q96PG8 261 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 ARHGAP9Q9BRR9 750 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 RHBGQ9H310 441 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 NOL11Q9H8H0 719 aaKnown RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 ACTR8Q9H981 624 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 ZBTB26Q9HCK0 441 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 MKKSQ9NPJ1 570 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 HCN3Q9P1Z3 774 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 LGALS13Q9UHV8 139 aa14.45□□□□□ -0.1
UBE3B-201ENST00000340074 SMG1Q96Q15 3661 aaKnown RBP14.45□□□□□ -0.1
UBE3B-201ENST00000340074 LRIT2A6NDA9 550 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 C4orf51C9J302 202 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 DLX3O60479 287 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 GALR3O60755 368 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 RDH16O75452 317 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 TBX6O95947 436 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 RPS17P08708 135 aaKnown RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 SMIM10L1P0DMW3 83 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 PCNAP12004 261 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 CCT5P48643 541 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 STXBP1P61764 594 aaKnown RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 SLC18A2Q05940 514 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 LIPJQ5W064 366 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 LAS2Q8IYD9 372 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 OR7G3Q8NG95 312 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 OR52B6Q8NGF0 335 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 OR51Q1Q8NH59 317 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 APOBEC4Q8WW27 367 aaKnown RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 UBE2E3Q969T4 207 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 ATP6V1E2Q96A05 226 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 MS4A6EQ96DS6 147 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 SMIM10Q96HG1 83 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 CDK15Q96Q40 435 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 TGIF2Q9GZN2 237 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 SEMA4BQ9NPR2 832 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-201ENST00000340074 ACSS2Q9NR19 701 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 RNF11Q9Y3C5 154 aa14.44□□□□□ -0.1
UBE3B-201ENST00000340074 KALRNO60229 2985 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 COPEO14579 308 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ATXN7O15265 892 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 UGDHO60701 494 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 DNAJB6O75190 326 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 FAM87AP0C7U9 286 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ATP5F1P24539 256 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ARL1P40616 181 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 CCNG1P51959 295 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 POLE2P56282 527 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 HERVK_113P63132 956 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 OLR1P78380 273 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ATP1A4Q13733 1029 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 LY6DQ14210 128 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 PPP1R32Q7Z5V6 425 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 MRGPREQ86SM8 312 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 TRABD2AQ86V40 505 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ZC3H7AQ8IWR0 971 aaKnown RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 OR5T3Q8NGG3 340 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ZNF483Q8TF39 744 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 GAL3ST3Q96A11 431 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 TMEM237Q96Q45 408 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 CRB3Q9BUF7 120 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 TMEM109Q9BVC6 243 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 C1QTNF3Q9BXJ4 246 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ERVK-6Q9BXR3 956 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 C12orf65Q9H3J6 166 aaKnown RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 PRM3Q9NNZ6 103 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 RRAGDQ9NQL2 400 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-201ENST00000340074 GRID1Q9ULK0 1009 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 ATRXP46100 2492 aa14.43□□□□□ -0.1
UBE3B-201ENST00000340074 BSNQ9UPA5 3926 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 A0A0G2JN53 185 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 ARGFXA6NJG6 315 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 JRKO75564 520 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 BMP10O95393 424 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 CLDN9O95484 217 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 PROCP04070 461 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 TSPAN8P19075 237 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 MMP11P24347 488 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 XCR1P46094 333 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 CDH13P55290 713 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 SKP1P63208 163 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 ZNF844Q08AG5 666 aa14.42□□□□□ -0.1
UBE3B-201ENST00000340074 CHAF1BQ13112 559 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms