RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FRMPD2BQ6IN97 320 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FAM92BQ6ZTR7 304 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ASPGQ86U10 573 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 Q8N9G6 341 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR4C6Q8NH72 309 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NCSTNQ92542 709 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MS4A6EQ96DS6 147 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 AHCYL2Q96HN2 611 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CLPTM1LQ96KA5 538 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TRAPPC9Q96Q05 1148 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 MAP3K3Q99759 626 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ZFYVE21Q9BQ24 234 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GTPBP2Q9BX10 602 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 IL1RL2Q9HB29 575 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LHX9Q9NQ69 397 aa14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LEF1Q9UJU2 399 aaPredicted RBP14.07□□□□□ -0.16
CDK5RAP3-201ENST00000338399 IGHV1OR21-1A0A087WYE8 117 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LOC105369274A0A096LPK9 316 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LOC102723532A0A0G2JNH3 316 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLC9B1P1A6NJY1 282 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SIGLEC6O43699 453 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KIF1CO43896 1103 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SH3BP5O60239 455 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EPN2O95208 641 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 IL6P05231 212 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PGRP06401 933 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PRPS1L1P21108 318 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GFERP55789 205 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RELAQ04206 551 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PGS1Q32NB8 556 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ADPRMQ3LIE5 342 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TMEM35AQ53FP2 167 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 COQ5Q5HYK3 327 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CCNYL2Q5T2Q4 361 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR4C11Q6IEV9 310 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLC2A7Q6PXP3 512 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PAGE2Q7Z2X7 111 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR4N4Q8N0Y3 316 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PGAM4Q8N0Y7 254 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EFCAB3Q8N7B9 438 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C19orf47Q8N9M1 422 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C16orf78Q8WTQ4 265 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TGM7Q96PF1 710 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C17orf62Q9BQA9 187 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NDE1Q9NXR1 346 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RP1P56715 2156 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SCN3AQ9NY46 2000 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DMDP11532 3685 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C4orf51C9J302 202 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TNFRSF10AO00220 468 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ERI3O43414 337 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 B4GAT1O43505 415 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PRMT3O60678 531 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 S100A3P33764 101 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TAS2R50P59544 299 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PLIN5Q00G26 463 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RGS1Q08116 209 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NFYCQ13952 458 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 UGT8Q16880 541 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 AMZ1Q400G9 498 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 HACD2Q6Y1H2 254 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 RNF44Q7L0R7 432 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 DGLUCYQ7Z3D6 616 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NUDT13Q86X67 352 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ARHGAP24Q8N264 748 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 EID2Q8N6I1 236 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 KCT2Q8NC54 265 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR7A2PQ8NGA2 310 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TESCQ96BS2 214 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ROPN1LQ96C74 230 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TM4SF19Q96DZ7 209 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 THAP11Q96EK4 314 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 LOXL4Q96JB6 756 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 OR52E6Q96RD3 313 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLC39A3Q9BRY0 314 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SLC6A16Q9GZN6 736 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 FAM60AQ9NP50 221 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C1GALT1Q9NS00 363 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 CROTQ9UKG9 612 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PCDHGA7Q9Y5G6 932 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ASXL3Q9C0F0 2248 aa14.06□□□□□ -0.16
CDK5RAP3-201ENST00000338399 UNC13CQ8NB66 2214 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 A0A088AWK7 358 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ARHGAP10A1A4S6 786 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 H0YGG7 62 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 P2RX6O15547 441 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 COX7A2P14406 83 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 SSR2P43308 183 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 GPR3P46089 330 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ARF3P61204 181 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PSME3P61289 254 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 STXBP1P61764 594 aaKnown RBP14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PHC1P78364 1004 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 C2orf80Q0P641 193 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 PWP1Q13610 501 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 NR0B2Q15466 257 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 TCEAL6Q6IPX3 200 aa14.05□□□□□ -0.16
CDK5RAP3-201ENST00000338399 ANKRD26P1Q6NSI1 321 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms