RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PHF11Q9UIL8 331 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 RFPL3O75679 317 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 BMP7P18075 431 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 HRH2P25021 359 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 CLCN4P51793 760 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 CCL23P55773 120 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 NTRK2Q16620 822 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 GATAD2BQ8WXI9 593 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 DNASE1L2Q92874 299 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 MCMBPQ9BTE3 642 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 RANBP3Q9H6Z4 567 aaPredicted RBP12.81□□□□□ -0.36
COL2A1-201ENST00000337299 EQTNQ9NQ60 294 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 HPF1Q9NWY4 346 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 GULP1Q9UBP9 304 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
COL2A1-201ENST00000337299 PTHP01270 115 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 RHOQP17081 205 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 RYKP34925 604 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 CNR2P34972 360 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 PBX3P40426 434 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 CLCNKBP51801 687 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 CDKL4Q5MAI5 379 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 FAM171A1Q5VUB5 890 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 LETMD1Q6P1Q0 360 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 CNIH2Q6PI25 160 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 HAGHLQ6PII5 290 aaPredicted RBP12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ST8SIA2Q92186 375 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 REPS1Q96D71 796 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ZC3H10Q96K80 434 aaKnown RBP12.8□□□□□ -0.36
COL2A1-201ENST00000337299 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 FARSBQ9NSD9 589 aaKnown RBP12.8□□□□□ -0.36
COL2A1-201ENST00000337299 NUP188Q5SRE5 1749 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 A0A1W2PPK0 400 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 MANBAO00462 879 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 KCNK2O95069 426 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 SMPD1P17405 629 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 HTR3AP46098 478 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 TOR1AIP1Q5JTV8 583 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 NDUFAF5Q5TEU4 345 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ATG9BQ674R7 924 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 HMGN2P46Q86SG4 172 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 DDX53Q86TM3 631 aaKnown RBP12.8□□□□□ -0.36
COL2A1-201ENST00000337299 FAM46DQ8NEK8 389 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 DYNC2LI1Q8TCX1 351 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 RFT1Q96AA3 541 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 TMEM169Q96HH4 297 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 CCDC115Q96NT0 180 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 SLC39A1Q9NY26 324 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ALG5Q9Y673 324 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 CACNA1CQ13936 2221 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 PRPS1L1P21108 318 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 HNMTP50135 292 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ANXA11P50995 505 aaKnown RBP12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ISL1P61371 349 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 PRKCDQ05655 676 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 SLC3A1Q07837 685 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 HSPB3Q12988 150 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 DUOXA1Q1HG43 343 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 MTFR2Q6P444 385 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 WASH2PQ6VEQ5 465 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 MBOAT1Q6ZNC8 495 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 SPAG16Q8N0X2 631 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 B3GNT7Q8NFL0 401 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF607Q96SK3 696 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 AIFM2Q9BRQ8 373 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 TTTY10Q9BZA0 68 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 ARL6Q9H0F7 186 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 TAS2R3Q9NYW6 316 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
COL2A1-201ENST00000337299 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CD8B2A6NJW9 211 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 IRAK2O43187 625 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CHST10O43529 356 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CD8BP10966 210 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PIM1P11309 404 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 GHRHRQ02643 423 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 RETSATQ6NUM9 610 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 OTOP2Q7RTS6 562 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SNX20Q7Z614 316 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CFAP206Q8IYR0 622 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 L3HYPDHQ96EM0 354 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 MAGEB10Q96LZ2 347 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF382Q96SR6 550 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 C11orf54Q9H0W9 315 aaPredicted RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 BRD9Q9H8M2 597 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 GALNT9Q9HCQ5 603 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 DNMT3LQ9UJW3 386 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 SLC22A14Q9Y267 594 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 NUP98P52948 1817 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CLDN24A6NM45 220 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF487B1APH4 448 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ALDH2P05091 517 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
COL2A1-201ENST00000337299 CXCR2P25025 360 aa12.79□□□□□ -0.36
COL2A1-201ENST00000337299 ITGA3P26006 1051 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms