RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 NUDT4Q9NZJ9 180 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 MRPS18CQ9Y3D5 142 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 TPRP12270 2363 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 CTNSO60931 367 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 NEURL1O76050 574 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 SEC31AO94979 1220 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 WDPCPO95876 746 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 MRPL49Q13405 166 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 NHSL2Q5HYW2 709 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 GRTP1Q5TC63 336 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 CRLF3Q8IUI8 442 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 PDIK1LQ8N165 341 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 KRT78Q8N1N4 520 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 FAM57AQ8TBR7 257 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 MMABQ96EY8 250 aaPredicted RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 WDR83Q9BRX9 315 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 TBCDQ9BTW9 1192 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 FBXO6Q9NRD1 293 aaPredicted RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP16-201ENST00000334352 TRPC4Q9UBN4 977 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 SEC14L3Q9UDX4 400 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 DYRK1BQ9Y463 629 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 ANKRD12Q6UB98 2062 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 FOXE1O00358 373 aaPredicted RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 CYR61O00622 381 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 BCKDKO14874 412 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 TMCC2O75069 709 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 SEMA3DO95025 777 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 ALAS2P22557 587 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 GLRBP48167 497 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 ARG2P78540 354 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 NAA30Q147X3 362 aaPredicted RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 ELAVL1Q15717 326 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 GGTA1PQ4G0N0 100 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 PIGGQ5H8A4 983 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 PAQR3Q6TCH7 311 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 LDB1Q86U70 411 aaPredicted RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 THOC6Q86W42 341 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 DENND6AQ8IWF6 608 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 CPNE9Q8IYJ1 553 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 OR1N1Q8NGS0 311 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 SLC13A3Q8WWT9 602 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 TP53INP1Q96A56 240 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 DTNBP1Q96EV8 351 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 LPAR4Q99677 370 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 CXXC4Q9H2H0 198 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 ZBTB20Q9HC78 741 aaPredicted RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 MS4A12Q9NXJ0 267 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 VTI1BQ9UEU0 232 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 ZC3H7BQ9UGR2 993 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 PRDM4Q9UKN5 801 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 YARS2Q9Y2Z4 477 aaKnown RBP5.99□□□□□ -1.45
USP16-201ENST00000334352 MAD1L1Q9Y6D9 718 aa5.99□□□□□ -1.45
USP16-201ENST00000334352 WDFY3Q8IZQ1 3526 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 LRIT2A6NDA9 550 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 AQP7O14520 342 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 SUSD5O60279 629 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 LCMT2O60294 686 aaKnown RBP5.98□□□□□ -1.45
USP16-201ENST00000334352 RNF224P0DH78 156 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 MST1P26927 711 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 CRABP2P29373 138 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 KCNJ1P48048 391 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 CASP6P55212 293 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 RIPPLY3P57055 190 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 EFTUD2Q15029 972 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP16-201ENST00000334352 TBCELQ5QJ74 424 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 LIPJQ5W064 366 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 B3GNT7Q8NFL0 401 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 OR2L5Q8NG80 312 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 MS4A6EQ96DS6 147 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 LINGO1Q96FE5 620 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 ART5Q96L15 291 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 AICDAQ9GZX7 198 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 IARS2Q9NSE4 1012 aaKnown RBP5.98□□□□□ -1.45
USP16-201ENST00000334352 KCMF1Q9P0J7 381 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 ACOT9Q9Y305 439 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 ASB1Q9Y576 335 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 KCNE2Q9Y6J6 123 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 ASPMQ8IZT6 3477 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 KNTC1P50748 2209 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 A0A087X1B8 175 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 ADAM10O14672 748 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 CLGNO14967 610 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 CHST10O43529 356 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 COL6A2P12110 1019 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 CDH1P12830 882 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 NAGAP17050 411 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 GNAZP19086 355 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 ELAVL4P26378 380 aaKnown RBP5.98□□□□□ -1.45
USP16-201ENST00000334352 CD96P40200 585 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 PIK3CGP48736 1102 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 CDC16Q13042 620 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 BRD3Q15059 726 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 PCBP2Q15366 365 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP16-201ENST00000334352 HIF1AQ16665 826 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 SFT2D3Q587I9 215 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 VWA2Q5GFL6 755 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 RIPPLY2Q5TAB7 128 aa5.98□□□□□ -1.45
USP16-201ENST00000334352 MRM1Q6IN84 353 aaKnown RBP5.98□□□□□ -1.45
USP16-201ENST00000334352 GRHL2Q6ISB3 625 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms