RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MYO10Q9HD67 2058 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 RTCAO00442 366 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 JRKO75564 520 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 C8AP07357 584 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 HLA-EP13747 358 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 SOX6P35712 828 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ASMTP46597 345 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 PRKAG1P54619 331 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 MRPS15P82914 257 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 TAB1Q15750 504 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 TPGS2Q68CL5 300 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 CAPN13Q6MZZ7 669 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 IPCEF1Q8WWN9 437 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 FAM129BQ96TA1 746 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 CCM2Q9BSQ5 444 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 TMCC3Q9ULS5 477 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 ERVK-11Q9UQG0 969 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 CHD5Q8TDI0 1954 aa12.4□□□□□ -0.42
HMGCS1-201ENST00000325110 GRM6O15303 877 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 AQP9O43315 295 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 NUAK1O60285 661 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 ATG13O75143 517 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 WBP4O75554 376 aaKnown RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 APOL3O95236 402 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 KRT8P05787 483 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 PABPC1P11940 636 aaKnown RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 TNNI3P19429 210 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 PTPN6P29350 595 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 CD6P30203 668 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 CDK6Q00534 326 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 HSPB3Q12988 150 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 SMU1Q2TAY7 513 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 ZC3H12BQ5HYM0 836 aaKnown RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 AKAP14Q86UN6 197 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 GATAD2AQ86YP4 633 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 GPR65Q8IYL9 337 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC7A5P1Q8MH63 180 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 Q8N9G6 341 aaPredicted RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 KBTBD8Q8NFY9 601 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 DYNC2LI1Q8TCX1 351 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 OTULINQ96BN8 352 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF300Q96RE9 604 aaPredicted RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 CNPPD1Q9BV87 410 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 OR2AG1Q9H205 316 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 LINC00597Q9H2U6 94 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 DNAJC27Q9NZQ0 273 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 NDRG4Q9ULP0 352 aaKnown RBP12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 PCDHGA6Q9Y5G7 932 aa12.4□□□□□ -0.43
HMGCS1-201ENST00000325110 PATJQ8NI35 1801 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 TTC34A8MYJ7 566 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 PCDH17O14917 1159 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 PTHP01270 115 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 CYP2A6P11509 494 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 GPX2P18283 190 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 POLR2EP19388 210 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 PTGER1P34995 402 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 DEFA1P59665 94 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 DEFA3P59666 94 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 CBX2Q14781 532 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 LEXMQ3ZCV2 418 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 RAET1GQ6H3X3 334 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 TMEM150AQ86TG1 271 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF740Q8NDX6 193 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 ADAMTS19Q8TE59 1207 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 CENPOQ9BU64 300 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 RETREG1Q9H6L5 497 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 ERVK13-1Q9NX77 482 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 POU2F3Q9UKI9 436 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 B3GNT3Q9Y2A9 372 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 PMF1-BGLAPU3KQ54 211 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 TRBC2A0A5B9 178 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 A8MV72 311 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 LOC110117498-PIK3R3F6TDL0 507 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 GRK3P35626 688 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC19A1P41440 591 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 GZMMP51124 257 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 PPP5CP53041 499 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 CCDC92Q53HC0 331 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 C6orf183Q5T699 404 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 DEPDC1Q5TB30 811 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 TRIM40Q6P9F5 258 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 SPATC1Q76KD6 591 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 MMP21Q8N119 569 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 CBARPQ8N350 705 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 L3MBTL4Q8NA19 623 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 ASAH2Q9NR71 780 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 SCHIP1Q9P0W5 487 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF282Q9UDV7 671 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 MOSPD1Q9UJG1 213 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 ASF1AQ9Y294 204 aa12.39□□□□□ -0.43
HMGCS1-201ENST00000325110 DNAJB5O75953 348 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC6A12P48065 614 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms