RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 NATD1Q8N6N6 113 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PLA2G15Q8NCC3 412 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PIH1D2Q8WWB5 315 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC25A46Q96AG3 418 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CHFRQ96EP1 664 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 OPALINQ96PE5 141 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CCM2Q9BSQ5 444 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FBXO10Q9UK96 956 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1B0GVI7 797 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC12A8A0AV02 714 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SGK494L7N484 410 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TLR4O00206 839 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TPPPO94811 219 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 VIPP01282 170 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CYP17A1P05093 508 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 C8GP07360 202 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NAT1P18440 290 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TGFBR1P36897 503 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RRAS2P62070 204 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SPIBQ01892 262 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SMARCB1Q12824 385 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF792Q3KQV3 632 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RAP1GAP2Q684P5 730 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 IKBIPQ70UQ0 350 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF683Q8IZ20 524 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 OR8H1Q8NGG4 311 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CLHC1Q8NHS4 586 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SCAMP5Q8TAC9 235 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GPR151Q8TDV0 419 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MTERF3Q96E29 417 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 QRFPRQ96P65 431 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ACAT2Q9BWD1 397 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ACPTQ9BZG2 426 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 UCK2Q9BZX2 261 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 DNMT3LQ9UJW3 386 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 BOLA1Q9Y3E2 137 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 STON1Q9Y6Q2 735 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1B0GVM2 712 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1B0GW55 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TRBC1P01850 177 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4L2P0CJ85 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4L3P0CJ86 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4L4P0CJ87 422 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4L5P0CJ88 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4L6P0CJ89 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4L7P0CJ90 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 UBL4AP11441 157 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF30P17039 623 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 HOXB9P17482 250 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 HOXD9P28356 352 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ILKQ13418 452 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GRK1Q15835 563 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PYDC2Q56P42 97 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ANKRD46Q86W74 232 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OXR1Q8N573 874 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DNAJB3Q8WWF6 145 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NACC2Q96BF6 587 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CDCA5Q96FF9 252 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 MCOLN1Q9GZU1 580 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TXNRD2Q9NNW7 524 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GLTPQ9NZD2 209 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DUX4Q9UBX2 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 FZD4Q9ULV1 537 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1W2PQH9 124 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 C17orf102A2RUQ5 167 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CPSF4O95639 269 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PRLP01236 227 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PSKH1P11801 424 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GPLD1P80108 840 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 BTBD16Q32M84 506 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GCNT6Q5T4J0 391 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CTU1Q7Z7A3 348 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF598Q86UK7 904 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NPAS3Q8IXF0 933 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TPD52L3Q96J77 140 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SUSD3Q96L08 255 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 KCNC2Q96PR1 638 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SYT17Q9BSW7 474 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 TEX12Q9BXU0 123 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 IL20Q9NYY1 176 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 NDOR1Q9UHB4 597 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 EVLQ9UI08 416 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 DIMT1Q9UNQ2 313 aaKnown RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 THSD7AQ9UPZ6 1657 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 OR5K3A6NET4 321 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ZAR1LA6NP61 321 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SLC19A2O60779 497 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 USP2O75604 605 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SLC25A14O95258 325 aaPredicted RBP4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RHCEP18577 417 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 GRK5P34947 590 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 ETV3P41162 512 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 SLC19A1P41440 591 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 RPIAP49247 311 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CD83Q01151 205 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 FPGSQ05932 587 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 PTPRCAPQ14761 206 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 VEPH1Q14D04 833 aa4.6□□□□□ -1.67
PTPN13-201ENST00000316707 CTSL3PQ5NE16 218 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms