RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 E9PAM4 449 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 ULK1O75385 1050 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 HOXD10P28358 340 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 CLCN7P51798 805 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 UBE3AQ05086 875 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 HNRNPA0Q13151 305 aaKnown RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 MAD2L1Q13257 205 aaPredicted RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 GALEQ14376 348 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 LCN1P1Q5VSP4 162 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 TEX261Q6UWH6 196 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 RGL4Q8IZJ4 473 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 C9orf62Q8N4C0 152 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 RTL3Q8N8U3 475 aaKnown RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 C3orf58Q8NDZ4 430 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 ZNF680Q8NEM1 530 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 GPR152Q8TDT2 470 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 POP5Q969H6 163 aaKnown RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 DACT3Q96B18 629 aaPredicted RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 MAGEB10Q96LZ2 347 aaPredicted RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 HYLS1Q96M11 299 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 WDFY2Q96P53 400 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 QRFPRQ96P65 431 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 SEMA3CQ99985 751 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 MIXL1Q9H2W2 232 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 STOML2Q9UJZ1 356 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 U3KQ87 197 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 LINC00862A6NCI5 91 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 HOXC8P31273 242 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 PER3P56645 1201 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 RRAS2P62070 204 aaPredicted RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 VMACQ2NL98 169 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 ANKRD54Q6NXT1 300 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 FAM124AQ86V42 546 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 UPRTQ96BW1 309 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 C8orf48Q96LL4 319 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 ADAM2Q99965 735 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 NIPSNAP1Q9BPW8 284 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 NSUN3Q9H649 340 aaKnown RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 SRRDQ9UH36 339 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 MAPRE3Q9UPY8 281 aa17.38■□□□□ 0.37
SPSB4-201ENST00000310546 NYNRINQ9P2P1 1898 aaKnown RBP17.38■□□□□ 0.37
SPSB4-201ENST00000310546 SLC9A3R1O14745 358 aaPredicted RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 FABP7O15540 132 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TALDO1P37837 337 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 ACVR1Q04771 509 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CDH18Q13634 790 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 DSC3Q14574 896 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CCNJQ5T5M9 372 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TRIQKQ629K1 86 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 LRRC66Q68CR7 880 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 GDPD1Q8N9F7 314 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 OSER1Q9NX31 292 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 SLC35F4A4IF30 521 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TNFRSF11BO00300 401 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CLEC2LP0C7M8 214 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CHMP24386 653 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 APEX1P27695 318 aaKnown RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 RAB41Q5JT25 222 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 LRIF1Q5T3J3 769 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 COMMD7Q86VX2 200 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 SLC34A3Q8N130 599 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 SLC37A3Q8NCC5 494 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 DENND6BQ8NEG7 585 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 C9orf43Q8TAL5 461 aaPredicted RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 ZNF296Q8WUU4 475 aaPredicted RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TMEM203Q969S6 136 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TOE1Q96GM8 510 aaKnown RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TAPBPLQ9BX59 468 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 DLGAP4Q9Y2H0 992 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 PCDHGB3Q9Y5G1 929 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 SLC2A2P11168 524 aaPredicted RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 ARSBP15848 533 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TNFRSF1BP20333 461 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CCT3P49368 545 aaKnown RBP17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TOR1AIP1Q5JTV8 583 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 KIF18BQ86Y91 864 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 OR10G2Q8NGC3 310 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 OR4K2Q8NGD2 314 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 SCAMP5Q8TAC9 235 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 SPPL2AQ8TCT8 520 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CDCA4Q9BXL8 241 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 TMEM245Q9H330 911 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CRISPLD1Q9H336 500 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 CLEC2DQ9UHP7 191 aa17.37■□□□□ 0.37
SPSB4-201ENST00000310546 LOC285095A0A1B0GVY8 99 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 ENGP17813 658 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 PTPN6P29350 595 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 ACLYP53396 1101 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 PPIGQ13427 754 aaKnown RBP eCLIP17.36■□□□□ 0.37
SPSB4-201ENST00000310546 TOP6BLQ8N6T0 577 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 ARRDC2Q8TBH0 407 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 LOC102723532A0A0G2JNH3 316 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 ARL5CA6NH57 179 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 CLIC1O00299 241 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 KCNK5O95279 499 aa17.36■□□□□ 0.37
SPSB4-201ENST00000310546 TP53P04637 393 aaPredicted RBP17.36■□□□□ 0.37
SPSB4-201ENST00000310546 INHAP05111 366 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms