RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 RTP4Q96DX8 246 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 CDC14AQ9UNH5 594 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 PPEF2O14830 753 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 USP2O75604 605 aaPredicted RBP12.75□□□□□ -0.37
SNED1-201ENST00000310397 FSHRP23945 695 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 BTBD16Q32M84 506 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 CPQQ9Y646 472 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 MIA3Q5JRA6 1907 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 FXYD6-FXYD2A0A087WZ82 144 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CENPBD1B2RD01 187 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CYB5AP00167 134 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ATP5A1P25705 553 aaKnown RBP12.74□□□□□ -0.37
SNED1-201ENST00000310397 IL12BP29460 328 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PSMD8P48556 350 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CEACAM7Q14002 265 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ABHD13Q7L211 337 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CNIH3Q8TBE1 160 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 RPL10LQ96L21 214 aaKnown RBP12.74□□□□□ -0.37
SNED1-201ENST00000310397 MYRFLQ96LU7 910 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SCP2D1Q9UJQ7 156 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 OARD1Q9Y530 152 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SOBPA7XYQ1 873 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 E2F1Q01094 437 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SP2Q02086 613 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ATAT1Q5SQI0 421 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 DNM1P34Q6PK57 102 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ELMOD2Q8IZ81 293 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PSD4Q8NDX1 1056 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SHISA4Q96DD7 197 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 FAM129BQ96TA1 746 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 EXO5Q9H790 373 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SMURF1Q9HCE7 757 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 RNF11Q9Y3C5 154 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 LRRC72A6NJI9 287 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PRKYO43930 277 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 EDNRAP25101 427 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 TAS2R50P59544 299 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 TRAM2Q15035 370 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 HFE2Q6ZVN8 426 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ZFAND4Q86XD8 727 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PTPN18Q99952 460 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 HSD3B1P14060 373 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 HSD3B2P26439 372 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 DCKP27707 260 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SP3Q02447 781 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 TPGS2Q68CL5 300 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 TMIGD1Q6UXZ0 262 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CTPS2Q9NRF8 586 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 ASB3Q9Y575 518 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PHRF1Q9P1Y6 1649 aaKnown RBP12.74□□□□□ -0.37
SNED1-201ENST00000310397 PLD2O14939 933 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CSKP41240 450 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 NOXRED1Q6NXP6 359 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 MGLLQ99685 303 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CCM2Q9BSQ5 444 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 B3GNT4Q9C0J1 378 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
SNED1-201ENST00000310397 POLE4Q9NR33 117 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 CSF2P04141 144 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 MATN1P21941 496 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PMS2P3Q13401 168 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 PON3Q15166 354 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 RPL13AP3Q6NVV1 102 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 RPLP0P6Q8NHW5 317 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 SHKBP1Q8TBC3 707 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 IMP4Q96G21 291 aaKnown RBP12.74□□□□□ -0.37
SNED1-201ENST00000310397 LMLNQ96KR4 655 aa12.74□□□□□ -0.37
SNED1-201ENST00000310397 RHCEP18577 417 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 NDUFS1P28331 727 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 CEBPGP53567 150 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 CASP9P55211 416 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 SLC13A2Q13183 592 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 PTCHD3Q3KNS1 767 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 OR52E8Q6IFG1 317 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 SLC27A4Q6P1M0 643 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 TMEM246Q9BRR3 403 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 TSSK6Q9BXA6 273 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 UTS2RQ9UKP6 389 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 ITGB4P16144 1822 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 PROM1O43490 865 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 KDELR3O43731 214 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 EPHX1P07099 455 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 CFL1P23528 166 aaKnown RBP12.73□□□□□ -0.37
SNED1-201ENST00000310397 SNAP47Q5SQN1 464 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 LRRC66Q68CR7 880 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 GET4Q7L5D6 327 aaPredicted RBP12.73□□□□□ -0.37
SNED1-201ENST00000310397 FCAMRQ8WWV6 532 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 METTL8Q9H825 291 aaKnown RBP12.73□□□□□ -0.37
SNED1-201ENST00000310397 ELOA3DA6NLF2 546 aaPredicted RBP12.73□□□□□ -0.37
SNED1-201ENST00000310397 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 IL3P08700 152 aa12.73□□□□□ -0.37
SNED1-201ENST00000310397 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms