RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 KIF26BQ2KJY2 2108 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 SNRNP200O75643 2136 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 HEATR5BQ9P2D3 2071 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 ULK1O75385 1050 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 SEMA3DO95025 777 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 CAPNS1P04632 268 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 UROSP10746 265 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 IL10P22301 178 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 PPP2R2AP63151 447 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 CYP4F2P78329 520 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 CUL3Q13618 768 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 DSG2Q14126 1118 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 NKAIN1Q4KMZ8 207 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF385CQ66K41 422 aaPredicted RBP17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 ATG16L1Q676U5 607 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 SYVN1Q86TM6 617 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 ARFGAP2Q8N6H7 521 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 GBP7Q8N8V2 638 aaPredicted RBP17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 SLC38A9Q8NBW4 561 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 OR2L5Q8NG80 312 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 MR1Q95460 341 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 NKD1Q969G9 470 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 FAR2Q96K12 515 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 CCT7Q99832 543 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 PAIP2Q9BPZ3 127 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 MS4A8Q9BY19 250 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 AHSPQ9NZD4 102 aa17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 DHCR7Q9UBM7 475 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-201ENST00000309328 SERTM1A2A2V5 107 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 OR4F21O95013 312 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 CAPN1P07384 714 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 CTSBP07858 339 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 FGF4P08620 206 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 UCNP55089 124 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 RPS15P62841 145 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 CSTF3Q12996 717 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 CHI3L2Q15782 390 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 PRAMEF17Q5VTA0 474 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 LRRC69Q6ZNQ3 347 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 RNF165Q6ZSG1 346 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 RPS27LQ71UM5 84 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 CUZD1Q86UP6 607 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 PROSER1Q86XN7 944 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 CDYL2Q8N8U2 506 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 KCT2Q8NC54 265 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 ADAMTS18Q8TE60 1221 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 SELENOMQ8WWX9 145 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 ZCCHC14Q8WYQ9 949 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 MS4A6EQ96DS6 147 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 TBCDQ9BTW9 1192 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 WDR54Q9H977 334 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 SYNPO2LQ9H987 977 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 ZNF304Q9HCX3 659 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 IFT80Q9P2H3 777 aaPredicted RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 GPN3Q9UHW5 284 aaPredicted RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 ZNF225Q9UK10 706 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 MAP4K5Q9Y4K4 846 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 PCDHGA6Q9Y5G7 932 aa17.01■□□□□ 0.31
SSSCA1-201ENST00000309328 AHCTF1Q8WYP5 2266 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 C1QTNF9BB2RNN3 333 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 PPP6CO00743 305 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 RECKO95980 971 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 CYC1P08574 325 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 C1QTNF9P0C862 333 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 TSPAN8P19075 237 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 NR1D1P20393 614 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 FBLP22087 321 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 EIF2S3P41091 472 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 WDR4P57081 412 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 HYAL2Q12891 473 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 DDX39BQ13838 428 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 ARL13AQ5H913 290 aaPredicted RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 TOR1AIP1Q5JTV8 583 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 DEPDC1Q5TB30 811 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 ARHGAP40Q5TG30 622 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 KHDRBS2Q5VWX1 349 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 TIPARPQ7Z3E1 657 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 VN1R5Q7Z5H4 357 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 UTP15Q8TED0 518 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 RGMAQ96B86 450 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 MMABQ96EY8 250 aaPredicted RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 MTERF1Q99551 399 aaKnown RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 NPLQ9BXD5 320 aaPredicted RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 SLC26A1Q9H2B4 701 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 COPS7BQ9H9Q2 264 aaPredicted RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 MKKSQ9NPJ1 570 aaPredicted RBP17■□□□□ 0.31
SSSCA1-201ENST00000309328 C14orf105Q9NVL8 296 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 ASPMQ8IZT6 3477 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 AKAP13Q12802 2813 aa17■□□□□ 0.31
SSSCA1-201ENST00000309328 WDR91A4D1P6 747 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 MANBAO00462 879 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 FFAR3O14843 346 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 KLF11O14901 512 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 AZIN1O14977 448 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 GPR42O15529 346 aa16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 ERI3O43414 337 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 GALR3O60755 368 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-201ENST00000309328 HSPA4LO95757 839 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms