RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RASSF4Q9H2L5 321 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 MMADHCQ9H3L0 296 aaPredicted RBP6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ERVMER34-1Q9H9K5 563 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 LHX9Q9NQ69 397 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SLAMF8Q9P0V8 285 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 SLC7A8Q9UHI5 535 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 ADGRE2Q9UHX3 823 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 FBXO4Q9UKT5 387 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 PCDHGA4Q9Y5G9 962 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 TENM4Q6N022 2769 aa6.65□□□□□ -1.34
PTCD2-201ENST00000308077 OR2A25A4D2G3 310 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 C2orf74A8MZ97 194 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 C1QTNF9BB2RNN3 333 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 RTCAO00442 366 aaKnown RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 TNFSF14O43557 240 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 AKAP10O43572 662 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PCDH7O60245 1069 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PRAMEF10O60809 474 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 CLEC3AO75596 197 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 B3GALT4O96024 378 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 ANXA6P08133 673 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 ANXA4P09525 319 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 C1QTNF9P0C862 333 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PVRP15151 417 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 TYRP1P17643 537 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 HRH2P25021 359 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 TPP2P29144 1249 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 SERPINB1P30740 379 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 BSGP35613 385 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PI4KAP42356 2102 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PSME3P61289 254 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 CAMK2BQ13554 666 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 CAPRIN1Q14444 709 aaKnown RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 UGT8Q16880 541 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 SLC5A12Q1EHB4 618 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 HKDC1Q2TB90 917 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 C11orf74Q86VG3 221 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 SYT12Q8IV01 421 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 SDR16C5Q8N3Y7 309 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 MFSD9Q8NBP5 474 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 GLB1L3Q8NCI6 653 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 WDR60Q8WVS4 1066 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PIGKQ92643 395 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 TESCQ96BS2 214 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 ROPN1LQ96C74 230 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 ZC3H10Q96K80 434 aaKnown RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 CDRT15Q96T59 188 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 ELF4Q99607 663 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 GPATCH1Q9BRR8 931 aaKnown RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 KLHL25Q9H0H3 589 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 KLHL31Q9H511 634 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 DENND2DQ9H6A0 471 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 IL1RL2Q9HB29 575 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 NMRK1Q9NWW6 199 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 HRASLS2Q9NWW9 162 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 LEF1Q9UJU2 399 aaPredicted RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 CROTQ9UKG9 612 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 SNX7Q9UNH6 387 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 EXO1Q9UQ84 846 aaKnown RBP6.65□□□□□ -1.35
PTCD2-201ENST00000308077 NEUROG3Q9Y4Z2 214 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 ENTPD2Q9Y5L3 495 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 AP1M2Q9Y6Q5 423 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 PCDH15Q96QU1 1955 aa6.65□□□□□ -1.35
PTCD2-201ENST00000308077 CACNA1EQ15878 2313 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 CROCCQ5TZA2 2017 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 DYTNA2CJ06 578 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 LILRA5A6NI73 299 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 NDUFS4O43181 175 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 ZW10O43264 779 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 CTSVO60911 334 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 MYO1DO94832 1006 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 SEMA3DO95025 777 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 SERPIND1P05546 499 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 PGRP06401 933 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 KLK1P06870 262 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 GNSP15586 552 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 GRK3P35626 688 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 AHRP35869 848 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 RXRGP48443 463 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 CLNS1AP54105 237 aaKnown RBP6.64□□□□□ -1.35
PTCD2-201ENST00000308077 MTTPP55157 894 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 C21orf58P58505 322 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 SNRPNP63162 240 aaKnown RBP6.64□□□□□ -1.35
PTCD2-201ENST00000308077 CEACAM7Q14002 265 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 ADPRMQ3LIE5 342 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 C14orf28Q4W4Y0 310 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 PIGGQ5H8A4 983 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 C6orf132Q5T0Z8 1188 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 FBXO42Q6P3S6 717 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 FIGLAQ6QHK4 219 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 BNC2Q6ZN30 1099 aaPredicted RBP6.64□□□□□ -1.35
PTCD2-201ENST00000308077 CEP68Q76N32 757 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 KANSL1Q7Z3B3 1105 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 VN1R4Q7Z5H5 301 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 OOSP2Q86WS3 158 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 HPS6Q86YV9 775 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 ARHGAP24Q8N264 748 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 DPP10Q8N608 796 aa6.64□□□□□ -1.35
PTCD2-201ENST00000308077 AMER3Q8N944 861 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms