RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 IFT88Q13099 833 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 DDX39BQ13838 428 aaKnown RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 RFTN2Q52LD8 501 aaPredicted RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 C10orf62Q5T681 223 aaPredicted RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 KHDRBS2Q5VWX1 349 aaKnown RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 ZNF385CQ66K41 422 aaPredicted RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 ABHD17CQ6PCB6 329 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 RAB11FIP2Q7L804 512 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 CSNK1A1LQ8N752 337 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 C19orf60Q96EN9 201 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 RNF31Q96EP0 1072 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 CMTM7Q96FZ5 175 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 FCRL1Q96LA6 429 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 DEPDC7Q96QD5 511 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 OR52B2Q96RD2 323 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 CTRCQ99895 268 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 MRPL1Q9BYD6 325 aaKnown RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 AKIRIN1Q9H9L7 192 aaPredicted RBP9.02□□□□□ -0.97
RFX3-201ENST00000302303 SIRT5Q9NXA8 310 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 VTI1BQ9UEU0 232 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 ADGRE2Q9UHX3 823 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 LOXL2Q9Y4K0 774 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 ASPMQ8IZT6 3477 aa9.02□□□□□ -0.97
RFX3-201ENST00000302303 CCDC187A0A096LP49 1063 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 HYKKA2RU49 373 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SRRM3A6NNA2 597 aaPredicted RBP9.01□□□□□ -0.97
RFX3-201ENST00000302303 C9orf172C9J069 976 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SLCO1B7G3V0H7 640 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 PLD2O14939 933 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 ZNF749O43361 778 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 EEDO75530 441 aaKnown RBP9.01□□□□□ -0.97
RFX3-201ENST00000302303 OR2B3O76000 313 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 EPHA3P29320 983 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SERPINB1P30740 379 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 EMP3P54852 163 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 ITGA1P56199 1179 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 ACY1Q03154 408 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 IL11RAQ14626 422 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 TOR1AIP1Q5JTV8 583 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 TCTE1Q5JU00 501 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 C6orf136Q5SQH8 315 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 TMTC4Q5T4D3 741 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 MRM1Q6IN84 353 aaKnown RBP9.01□□□□□ -0.97
RFX3-201ENST00000302303 GALNT18Q6P9A2 607 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 RIPOR1Q6ZS17 1223 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 PIGWQ7Z7B1 504 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 TMEM151BQ8IW70 566 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 METTL4Q8N3J2 472 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 ZNF655Q8N720 491 aaPredicted RBP9.01□□□□□ -0.97
RFX3-201ENST00000302303 GBP7Q8N8V2 638 aaPredicted RBP9.01□□□□□ -0.97
RFX3-201ENST00000302303 CAMKVQ8NCB2 501 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 OR2L5Q8NG80 312 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.01□□□□□ -0.97
RFX3-201ENST00000302303 C10orf82Q8WW14 230 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 REPS1Q96D71 796 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 FAR2Q96K12 515 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 CMKLR1Q99788 373 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 REXO4Q9GZR2 422 aaKnown RBP9.01□□□□□ -0.97
RFX3-201ENST00000302303 NPHS2Q9NP85 383 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SLC22A11Q9NSA0 550 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 VPS29Q9UBQ0 182 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SERTAD3Q9UJW9 196 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SATB2Q9UPW6 733 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 B3GALT1Q9Y5Z6 326 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 SLC22A7Q9Y694 548 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 KNTC1P50748 2209 aa9.01□□□□□ -0.97
RFX3-201ENST00000302303 A0A0G2JN53 185 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GOLGA8QA0A0J9YX86 632 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GOLGA8OA6NCC3 632 aa9□□□□□ -0.97
RFX3-201ENST00000302303 GOLGA8NF8WBI6 632 aa9□□□□□ -0.97
RFX3-201ENST00000302303 TMX2-CTNND1H3BSU7 103 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SLC28A1O00337 649 aa9□□□□□ -0.97
RFX3-201ENST00000302303 POLR1CO15160 346 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 ZSCAN9O15535 394 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 GALR3O60755 368 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 PEX11AO75192 247 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RSL1D1O76021 490 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 SEMA3DO95025 777 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SCELO95171 688 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ONECUT2O95948 504 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SERPIND1P05546 499 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ALDOCP09972 364 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 ZNF888P0CJ79 500 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 TPP2P29144 1249 aaPredicted RBP9□□□□□ -0.97
RFX3-201ENST00000302303 RORAP35398 523 aa9□□□□□ -0.97
RFX3-201ENST00000302303 ARL4DP49703 201 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PLA2G16P53816 162 aa9□□□□□ -0.97
RFX3-201ENST00000302303 AQP5P55064 265 aa9□□□□□ -0.97
RFX3-201ENST00000302303 RAB8AP61006 207 aa9□□□□□ -0.97
RFX3-201ENST00000302303 FOXM1Q08050 763 aa9□□□□□ -0.97
RFX3-201ENST00000302303 SF3A3Q12874 501 aaKnown RBP eCLIP9□□□□□ -0.97
RFX3-201ENST00000302303 RUNX2Q13950 521 aa9□□□□□ -0.97
RFX3-201ENST00000302303 FAM53BQ14153 422 aa9□□□□□ -0.97
RFX3-201ENST00000302303 PUM1Q14671 1186 aaKnown RBP eCLIP9□□□□□ -0.97
RFX3-201ENST00000302303 LSM12Q3MHD2 195 aaKnown RBP9□□□□□ -0.97
RFX3-201ENST00000302303 TMEM35AQ53FP2 167 aa9□□□□□ -0.97
RFX3-201ENST00000302303 LCN10Q6JVE6 187 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms