RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FAM126AQ9BYI3 521 aaPredicted RBP10.48□□□□□ -0.73
ZNF558-201ENST00000301475 NIPAL2Q9H841 368 aa10.48□□□□□ -0.73
ZNF558-201ENST00000301475 TEKT2Q9UIF3 430 aa10.48□□□□□ -0.73
ZNF558-201ENST00000301475 NINQ8N4C6 2090 aa10.48□□□□□ -0.73
ZNF558-201ENST00000301475 CCDC88CQ9P219 2028 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 DRGXA6NNA5 263 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 ARHGEF9O43307 516 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 TMCC2O75069 709 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CPSF4O95639 269 aaKnown RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CLEC2LP0C7M8 214 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PSKH1P11801 424 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PRPS2P11908 318 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 EPB42P16452 691 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 POLR2CP19387 275 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 OR1E2P47887 323 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 BNC1Q01954 994 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 DSC3Q14574 896 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 FAM205BPQ63HN1 556 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 TIGD3Q6B0B8 471 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CD300LGQ6UXG3 332 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 ZNF767PQ75MW2 155 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CLDN19Q8N6F1 224 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 C2orf69Q8N8R5 385 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 ENKURQ8TC29 256 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 OMA1Q96E52 524 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CCDC120Q96HB5 630 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 ZNF556Q9HAH1 456 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SMIM30A4D0T7 59 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CSO75390 466 aaKnown RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CCNB2O95067 398 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PRAMEF12O95522 483 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SRCP12931 536 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 HLA-EP13747 358 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CSTF2P33240 577 aaKnown RBP eCLIP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SPIBQ01892 262 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 RUNX1T1Q06455 604 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 VEZF1Q14119 521 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PTGES3Q15185 160 aaKnown RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SPATA2LQ8IUW3 424 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 BBS7Q8IWZ6 715 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CHTF18Q8WVB6 975 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 GTPBP3Q969Y2 492 aaKnown RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PSKH2Q96QS6 385 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CHST8Q9H2A9 424 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 FAM105AQ9NUU6 356 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 COQ3Q9NZJ6 369 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CNOT2Q9NZN8 540 aaKnown RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PRSS21Q9Y6M0 314 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 A0A1W2PQL4 384 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 FABP12A6NFH5 140 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 J3KTA2 159 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PLD2O14939 933 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 ADAMDEC1O15204 470 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 INSIG1O15503 277 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CLDN9O95484 217 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CR2P20023 1033 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CPN2P22792 545 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CRYBB1P53674 252 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 YBEYP58557 167 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 FOXD4Q12950 439 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 XKRXQ6PP77 449 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SLC51BQ86UW2 128 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 METTL23Q86XA0 190 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 UBTD2Q8WUN7 234 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 EID2BQ96D98 161 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 DIRAS2Q96HU8 199 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PTPN18Q99952 460 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 DOHHQ9BU89 302 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 CINPQ9BW66 212 aaPredicted RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 SLC29A3Q9BZD2 475 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 TPT1P8Q9HAU6 139 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 C12orf10Q9HB07 376 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 TLR8Q9NR97 1041 aaKnown RBP10.47□□□□□ -0.73
ZNF558-201ENST00000301475 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 ITM2BQ9Y287 266 aa10.47□□□□□ -0.73
ZNF558-201ENST00000301475 PLXNA3P51805 1871 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 CDRT1O95170 752 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 HBQ1P09105 142 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 ANXA8P13928 327 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 POU6F2P78424 691 aaPredicted RBP10.46□□□□□ -0.73
ZNF558-201ENST00000301475 HNRNPA0Q13151 305 aaKnown RBP10.46□□□□□ -0.73
ZNF558-201ENST00000301475 MICAQ29983 383 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 CYP27C1Q4G0S4 372 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.46□□□□□ -0.73
ZNF558-201ENST00000301475 PDZK1Q5T2W1 519 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 PXDC1Q5TGL8 231 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 PTRHD1Q6GMV3 140 aaKnown RBP10.46□□□□□ -0.73
ZNF558-201ENST00000301475 CREB3L4Q8TEY5 395 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 UPRTQ96BW1 309 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 MCOLN1Q9GZU1 580 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 PLEKHB1Q9UF11 243 aaPredicted RBP10.46□□□□□ -0.73
ZNF558-201ENST00000301475 FZD4Q9ULV1 537 aa10.46□□□□□ -0.73
ZNF558-201ENST00000301475 NDRG2Q9UN36 371 aaKnown RBP10.46□□□□□ -0.73
ZNF558-201ENST00000301475 RAI2Q9Y5P3 530 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms