RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CLCN4P51793 760 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 XKP51811 444 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 LASP1Q14847 261 aaKnown RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 UGT8Q16880 541 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 SYCE2Q6PIF2 218 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 POMZP3Q6PJE2 187 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 GDPD4Q6W3E5 623 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 USP43Q70EL4 1123 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 FGD2Q7Z6J4 655 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 TMEM25Q86YD3 366 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 MMAAQ8IVH4 418 aaKnown RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 DPP10Q8N608 796 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 ZNF433Q8N7K0 673 aaPredicted RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 TRPV1Q8NER1 839 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 HUS1BQ8NHY5 278 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 CXorf40AQ8TE69 158 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 POF1BQ8WVV4 589 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 MAGEB10Q96LZ2 347 aaPredicted RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 ZNF607Q96SK3 696 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 ASPNQ9BXN1 380 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 ELOVL2Q9NXB9 296 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 STMN3Q9NZ72 180 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 GULP1Q9UBP9 304 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 OR6C70A6NIJ9 312 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 FRS3O43559 492 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 RFPL2O75678 378 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 GSTT2P0CG29 244 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 GSTT2BP0CG30 244 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 PSMD8P48556 350 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 TLE2Q04725 743 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 CTU2Q2VPK5 515 aaKnown RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 ADNP2Q6IQ32 1131 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 CYP4Z2PQ8N1L4 340 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 TBC1D19Q8N5T2 526 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 TSPEARQ8WU66 669 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 RSPH9Q9H1X1 276 aaPredicted RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 POPDC3Q9HBV1 291 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 DCAF13Q9NV06 445 aaKnown RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 OARD1Q9Y530 152 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 POP7O75817 140 aaKnown RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 SAGP10523 405 aaPredicted RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 CLDN8P56748 225 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 INHBEP58166 350 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 ID2Q02363 134 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 MTA1Q13330 715 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 TUBA3CQ13748 450 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.82□□□□□ -0.365e-19■■■■■ 64.4
CASC4-201ENST00000299957 USP7Q93009 1102 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 LINC00597Q9H2U6 94 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 MCUBQ9NWR8 336 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 COL4A5P29400 1685 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 TLR4O00206 839 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 ACP5P13686 325 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 PRG2P13727 222 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 ANXA8P13928 327 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 PPIBP23284 216 aaKnown RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 C10orf62Q5T681 223 aaPredicted RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 C22orf39Q6P5X5 142 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 BORAQ6PGQ7 559 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 BCDIN3DQ7Z5W3 292 aaKnown RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 B3GNT8Q7Z7M8 397 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 SLC38A4Q969I6 547 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 FEZF1A0PJY2 475 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 SLC10A3P09131 477 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 CNR2P34972 360 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 CTNNB1P35222 781 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 RGS8P57771 180 aaPredicted RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 RING1Q06587 406 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 TMEM179BQ7Z7N9 219 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 VRK3Q8IV63 474 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 ZNF548Q8NEK5 533 aaPredicted RBP12.82□□□□□ -0.36
CASC4-201ENST00000299957 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
CASC4-201ENST00000299957 IQCMA0A1B0GVH7 501 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 AP1G1O43747 822 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 OR5F1O95221 314 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 OXSR1O95747 527 aaPredicted RBP12.81□□□□□ -0.36
CASC4-201ENST00000299957 IL3P08700 152 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 TYRP14679 529 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 RCVRNP35243 200 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 DSTNP60981 165 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 ATG9BQ674R7 924 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 C22orf42Q6IC83 251 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 PHYKPLQ8IUZ5 450 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 KREMEN2Q8NCW0 462 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 CMTM7Q96FZ5 175 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 F2RL3Q96RI0 385 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 CCM2Q9BSQ5 444 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 WACQ9BTA9 647 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 ZNF225Q9UK10 706 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 CORO2BQ9UQ03 480 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 GMEB1Q9Y692 573 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 CABIN1Q9Y6J0 2220 aa12.81□□□□□ -0.36
CASC4-201ENST00000299957 AP3D1O14617 1153 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms