RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 VRK3Q8IV63 474 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 DNASE1L2Q92874 299 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 APIPQ96GX9 242 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 CEP19Q96LK0 163 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 CHCHD6Q9BRQ6 235 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 PRM3Q9NNZ6 103 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 TMEM45AQ9NWC5 275 aa15.02■□□□□ -0
UBAP1-201ENST00000297661 PCDHGA12O60330 932 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 GJA1P17302 382 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 CCR7P32248 378 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 CD70P32970 193 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 RPS14P62263 151 aaKnown RBP15.02□□□□□ -0.01
UBAP1-201ENST00000297661 CYP4F8P98187 520 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 CREMQ03060 361 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 PROX2Q3B8N5 592 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 ATP13A5Q4VNC0 1218 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 SPOUT1Q5T280 376 aaKnown RBP15.02□□□□□ -0.01
UBAP1-201ENST00000297661 ARMC4Q5T2S8 1044 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 GPR149Q86SP6 731 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 NXPE1Q8N323 547 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 SLC7A6Q92536 515 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 SNAPC3Q92966 411 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 APOLD1Q96LR9 279 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 ROGDIQ9GZN7 287 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 SMG9Q9H0W8 520 aaKnown RBP15.02□□□□□ -0.01
UBAP1-201ENST00000297661 ATG10Q9H0Y0 220 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 ATP13A2Q9NQ11 1180 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 SERHLQ9NQF3 203 aa15.02□□□□□ -0.01
UBAP1-201ENST00000297661 NUFIP1Q9UHK0 495 aaKnown RBP15.02□□□□□ -0.01
UBAP1-201ENST00000297661 MYO1GB0I1T2 1018 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 B8ZZF3 427 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 hCG_2039718K7EN88 272 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 MEN1O00255 615 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 IFRD1O00458 451 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 TLL1O43897 1013 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CLDN9O95484 217 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 RETP07949 1114 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 HOXA9P31269 272 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 S100A3P33764 101 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 HNF4AP41235 474 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 B4GALNT1Q00973 533 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 BOP1Q14137 746 aaKnown RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 IRF3Q14653 427 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CDKN3Q16667 212 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 OR4F3Q6IEY1 312 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 DOK6Q6PKX4 331 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 TRIM46Q7Z4K8 759 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 OR52E4Q8NGH9 312 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ZNF461Q8TAF7 563 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 TRNT1Q96Q11 434 aaKnown RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 SLC30A2Q9BRI3 323 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 BBS2Q9BXC9 721 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 GON7Q9BXV9 100 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ELAC1Q9H777 363 aaKnown RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CERS4Q9HA82 394 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ABCG2Q9UNQ0 655 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 SNX8Q9Y5X2 465 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 LINC00854A0A1B0GVQ3 168 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 PER2O15055 1255 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CYP7B1O75881 506 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 EBLN1P0CF75 366 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 TRAPPC2P0DI81 140 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 TRAPPC2BP0DI82 140 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 PIK3CBP42338 1070 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 GPAT3Q53EU6 434 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 LRRC66Q68CR7 880 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ZDHHC21Q8IVQ6 265 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 HJURPQ8NCD3 748 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 APH1BQ8WW43 257 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ASIC4Q96FT7 647 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 KCNS3Q9BQ31 491 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 DPH2Q9BQC3 489 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 GABARAPL1Q9H0R8 117 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ELOVL6Q9H5J4 265 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 NRG2O14511 850 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 UGT2B17O75795 530 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 WDR47O94967 919 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 RPS3P23396 243 aaKnown RBP eCLIP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 SPAM1P38567 509 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 NRIP1P48552 1158 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 ARHGDIAP52565 204 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 AP1S1P61966 158 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 TBCEQ15813 527 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 KIAA1614Q5VZ46 1190 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CRTC1Q6UUV9 634 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 SERPINA13PQ6UXR4 307 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 UBE2R2Q712K3 238 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CYP4Z2PQ8N1L4 340 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 SETD6Q8TBK2 473 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 PYURFQ96I23 114 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 CPPED1Q9BRF8 314 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 MMP28Q9H239 520 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 AMBNQ9NP70 447 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
UBAP1-201ENST00000297661 PCDHGB2Q9Y5G2 931 aa15.01□□□□□ -0.01
UBAP1-201ENST00000297661 PTPRSQ13332 1948 aa15□□□□□ -0.01
UBAP1-201ENST00000297661 GREM1O60565 184 aa15□□□□□ -0.01
UBAP1-201ENST00000297661 PRAMEF4O60810 478 aa15□□□□□ -0.01
UBAP1-201ENST00000297661 ZNF821O75541 412 aaPredicted RBP15□□□□□ -0.01
UBAP1-201ENST00000297661 ARHGEF15O94989 841 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms