RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 CD22P20273 847 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 PTPN6P29350 595 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 PTPN5P54829 565 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 TMBIM6P55061 237 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 SP3Q02447 781 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 ZNF852Q6ZMS4 543 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 SNX20Q7Z614 316 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 ADHFE1Q8IWW8 467 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CHST14Q8NCH0 376 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 OR4K1Q8NGD4 311 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 OR5AK3PQ8NH89 298 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 HDAC2Q92769 488 aaKnown RBP12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CPPED1Q9BRF8 314 aaPredicted RBP12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 RLIMQ9NVW2 624 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 THG1LQ9NWX6 298 aaKnown RBP12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 C3orf18Q9UK00 162 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 SCN5AQ14524 2016 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 A0A1B0GWJ7 208 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 ZNF99A8MXY4 864 aaPredicted RBP12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CLIC1O00299 241 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 FPGTO14772 594 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 TSPAN6O43657 245 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 FAM20BO75063 409 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CLN5O75503 358 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 SULT1C4O75897 302 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 BMP4P12644 408 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 ALOX12P18054 663 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CDH3P22223 829 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 PCP4P48539 62 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 GDI2P50395 445 aaKnown RBP12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 EPS8Q12929 822 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CHIT1Q13231 466 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 HKDC1Q2TB90 917 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 IRAK1BP1Q5VVH5 260 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 GPR149Q86SP6 731 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 RORBQ92753 470 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 KLF16Q9BXK1 252 aaPredicted RBP12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 ABCB10Q9NRK6 738 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 RHCGQ9UBD6 479 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
KCNIP3-201ENST00000295225 LOC100506127A0A0U1RQW1 187 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 TMEM189-UBE2V1I3L0A0 370 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 J3KTA2 159 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ZNF821O75541 412 aaPredicted RBP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 IL6P05231 212 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 HSMCR30P0CW71 290 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 POU3F4P49335 361 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 PTSQ03393 145 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 LMAN2Q12907 356 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 SGCAQ16586 387 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 GLRX5Q86SX6 157 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 SYT12Q8IV01 421 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 TTC29Q8NA56 475 aaPredicted RBP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 HPS1Q92902 700 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 MUL1Q969V5 352 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 MUC13Q9H3R2 512 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ABCB8Q9NUT2 735 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 TMPRSS11EQ9UL52 423 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 YIPF1Q9Y548 306 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 LAMA1P25391 3075 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 FAM227AF5H4B4 570 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 SLC9A3R1O14745 358 aaPredicted RBP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ANXA5P08758 320 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 MSH3P20585 1137 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 HOXA9P31269 272 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 RCVRNP35243 200 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 SLC19A1P41440 591 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 GZMMP51124 257 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 GRSF1Q12849 480 aaKnown RBP eCLIP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 TPGS2Q68CL5 300 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 HORMAD1Q86X24 394 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ELMOD2Q8IZ81 293 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 NXPE1Q8N323 547 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 OPALINQ96PE5 141 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 C19orf43Q9BQ61 176 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ENPP5Q9UJA9 477 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ERVK-19Q9WJR5 959 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 ORC6Q9Y5N6 252 aa12.79□□□□□ -0.36
KCNIP3-201ENST00000295225 E7EQ34 232 aa12.78□□□□□ -0.36
KCNIP3-201ENST00000295225 ADAM11O75078 769 aa12.78□□□□□ -0.36
KCNIP3-201ENST00000295225 COX7A2P14406 83 aa12.78□□□□□ -0.36
KCNIP3-201ENST00000295225 ST13P50502 369 aaKnown RBP12.78□□□□□ -0.36
KCNIP3-201ENST00000295225 MC1RQ01726 317 aa12.78□□□□□ -0.36
KCNIP3-201ENST00000295225 SCRN3Q0VDG4 424 aa12.78□□□□□ -0.36
KCNIP3-201ENST00000295225 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms